Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01887 ATGGGTGCTGGAGGACCTGATGATGAAGAAAATAATAGGTGGCCGCCATGGTTGAAACCTCTGCTGAAAGAGCGTTTCTTTGTTCAATGTAAGATGCACGCTGATTCGCATAAGAGTGAGTGTAACATGTACTGTTTGGATTGTATGAATGGTGCTCTTTGTTCTCTCTGCCTCAATTATCATAAAGATCATCGCGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATATCCGGGGTTCAGACCTATATTATCAACAGTGCTAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCCGGCAAAGGTGTCACCAACACCTGTGAAGTCTGCGAGCGGAGTCTTCTCGACTCGTTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCAACGAGTTTCCAGAAGAAGAACAAGTTTGCTTCCATGATATCAGACTCAGAGGATTCATACAGCAGCAGTTGCAGCCATGGAAAACTGAACAACAACATCAAGGTGCAAAGCTTCACTCCTTCAACACCACCACCAACTTCAGTTAATTACAGAACAGCCAAAAGAAGAAAGGGAATTCCCCATCGTGCCCCAATGGGAGGACTAGTCTTGCAATACTAG 654 0.448 MGAGGPDDEENNRWPPWLKPLLKERFFVQCKMHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSTSFQKKNKFASMISDSEDSYSSSCSHGKLNNNIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLQY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01887 217 MobiDBLite consensus disorder prediction 179 217 - -
Vifa4g01887 217 MobiDBLite consensus disorder prediction 179 194 - -
Vifa4g01887 217 Pfam PLATZ transcription factor 70 141 IPR006734 -
Vifa4g01887 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01887 Vifa-Chr4 531076527 531077689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vifa4g01887 PLATZ 2.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01887 - - mtr:11444793 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01887 4 531076527 531077689 Vifa4g01887 4 531076527 531077689 ECH
Vifa1g05820 1 909600744 909602450 Vifa4g01887 4 531076527 531077689 PCT