Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01840 ATGATGATGCATGGATCCAAATCCAATTCTAGCAACAACAAATCATCATCAGCATCATTCACTGGTTCTGTATTCAATTTATCAACCACCATAATTGGTGCTGGAATCATGGCTTTACCAGCAGCTATGAAGGTCTTAGGTCTAACAATTGGTATTGTTTCCATCATCTTCCTTGCTTTGCTTACTCATACCTCTTTGGATATTCTCATGAGGTTTAGTAAAGTTGCTAAGGCTCAGTCTTATGGTGATGTTATGGGGTTTGCTTTTGGAAGTGTTGGAAGATTGATTTTTCAGATTGCTGTTCTTTTGAACAACTTTGGTATCCTTGTTGTCTACACCATCATTATTGGTGATGTACTGTCTGGAACATCTTCATCTGGAATTCATCATTTCGGCGTTCTAGAAGGATGGTTTGGCGAACACTGGTCGACCGGGCGGACTTTTGTTCTTTTTGTGACAACCCTTGTTGTATTTACTCCATTAGGATTCTTTAAAAGGATAGATTCATTGAGATATACTTCTGGTTTAGCAGTGGCTCTGGCAATTGTTTTTCTAGTCATAACTGCGGGAATCACGATTTTTAAATTGTTCAATGGAAGTATAGAGAGTCCTAGGTTGCTTCCTAATATTACCGATATGACATCTATTTGGAATCTCTTCACGGCTGCTCCGGTTCTTGTGACAGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAACTAGGAGACTCTTCACCAATACAACCAGTTATATCTGCATCACTGGTTCTGTGTTCAAGTATATACATTCTTACAGCTTTATTTGGATTTCTACTATTCGGCGAGTCAACTCTTGATGATGTACTGGCCAACTTTGACGCTGATCTCGGCATCCCTTATAGCCATCTGCTAAACGACATCGTTCGAATCAGCTACGCTCTTCATCTCATGCTTGTTTTCCCAGTTATTTTCTTTTCGCTTAGGTTCAATTTGGACGATCTTGTATTTCCCTCAGCCGGGTCACTGGAATTAGATAATTGTAGATTTTCATTGATCACTACTGGACTCATTTCATTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTCCAATTCACCGGTGCAACTGCTACTGTTTGCCTCGGGTTTATTTTCCCGGCCGCAATTGCTCTGAGGGATCCACATAGCATTGCAAAAAACACCAAAGTGAATCAAATTTAG 1218 0.3974 MMMHGSKSNSSNNKSSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIVSIIFLALLTHTSLDILMRFSKVAKAQSYGDVMGFAFGSVGRLIFQIAVLLNNFGILVVYTIIIGDVLSGTSSSGIHHFGVLEGWFGEHWSTGRTFVLFVTTLVVFTPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITIFKLFNGSIESPRLLPNITDMTSIWNLFTAAPVLVTAFVCHYNVHTIDNELGDSSPIQPVISASLVLCSSIYILTALFGFLLFGESTLDDVLANFDADLGIPYSHLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLVFPSAGSLELDNCRFSLITTGLISLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPHSIAKNTKVNQI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01840 405 Pfam Transmembrane amino acid transporter protein 18 390 IPR013057 -
Vifa4g01840 405 PANTHER AMINO ACID TRANSPORTER 10 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01840 Vifa-Chr4 520642870 520645037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01840 4 399 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.636 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01840 K14207 - gmx:100778699 624.78