Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01839 ATGATGGAGAAGAAAGCTATGGCTATTGAGAAGATCAATGCATATATGCAAAAGTTGAAAACAATGGAAAAGAAATTTGATCCATTACCTCATTTTACTTTGCATAAAGTGTTGTCTCAAATTTCTCCACAATTTTATACTAAAGATGAATTAACACAAATTGAGAAAGTCAATCATATTTTGTGTCAAGAAGCAAATCTCCCTCCTATTTCACAAAGTAAAGAAAAAAGAGTAGAAGTCGTCAATGATAAAAAAAGGCGTCGTCCAAATAATGAAGATATCATATATGATGGTGAAAGAAAAGTGAAATCAAAGTCTACAATTAGGAAGAAACCAATTATTCGCAAGAAAGAAACTATGTTATCACCGCCACCAGAATTGCCTAGTCATGTTAATAACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGTAAGGAATTGTTTAAATCAGATCTCAACTATTACCTCAATCGTCTTTCAATGCCGATTACACAAATTAAGTCTGATTTTCTCACAGAAATAGAAAAGACAACTTTGGAAACAAGAGATCATGAAGGAAAACCGATTGGTATAAAAGTGATTGTGTTAGATCCTTGTTTTAACGAATTTTCGTTGTTTTTGAAGAAGTGGAACATGAAGACTACTAGTATTTATAATCTTCATCAAGATTGGACACCTATTTTGTTGAAGAATAATTTTAAAGAAAATCAAAAACTTGACATTTGGTCATTTAGAATTAATGAGAAGTTGTACCTTTTACTCAATGATAATGAGACACACAAAATTGAAGAAAGTAGAGAGCTGAAGAATTCAACCGGGGTTTCGAAAAAGAAAGAAGAATGA 855 0.3099 MMEKKAMAIEKINAYMQKLKTMEKKFDPLPHFTLHKVLSQISPQFYTKDELTQIEKVNHILCQEANLPPISQSKEKRVEVVNDKKRRRPNNEDIIYDGERKVKSKSTIRKKPIIRKKETMLSPPPELPSHVNNMIKVLNGSDIKYIMCKELFKSDLNYYLNRLSMPITQIKSDFLTEIEKTTLETRDHEGKPIGIKVIVLDPCFNEFSLFLKKWNMKTTSIYNLHQDWTPILLKNNFKENQKLDIWSFRINEKLYLLLNDNETHKIEESRELKNSTGVSKKKEE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01839 284 Gene3D - 136 270 IPR015300 -
Vifa4g01839 284 Pfam B3 domain-containing protein At2g31720-like 127 231 IPR005508 GO:0003677
Vifa4g01839 284 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 47 260 IPR005508 GO:0003677
Vifa4g01839 284 Coils Coil 5 25 - -
Vifa4g01839 284 SUPERFAMILY DNA-binding pseudobarrel domain 145 257 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01839 Vifa-Chr4 520470866 520471720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01839 126 258 B3 DNA Binding Superfamily AT1G05930 24.444 4.78e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01839 - - psat:127101787 399.053