Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01824 ATGTTGCAAAAGAAAGCTATGGCTATTGAGAAGAAGATCAATGCATATATGCAACAGTTGAAAACAATGGAAAAGAAATTTGATCCATTACCTCATTTTACTTTGCATAGAGTGTTATCTCAAATTTCTCCACAATTTTATACTAAAGATGAGTTAACCCAAATTGAAAAAATCAATCACATTTTGAGTGAAGAAACAAATCTCTCTCTTATTTCACAAAGTAATGTGAAAAAAGTAGAAGTCAATGATGAAAAAAGTTGTTGTCCAAGTAATAAAGATATCATCTTTGATGAAGGTAGAAGAGTGAAACCAAAATCAGCAATTAGGAGGAAACCAATAATTCACAAAAAAGAAATTTTGTTGTCACCGCCACCAGAATTGCCTAGTCATGTTAATGACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGTAAGGAATTGTTTAAGTCAGATCTCAACAATAATCTCAATCGTCTTTCAATGCCAATTACACAAATCAAATCTGATTTCCTCACAGAAATAGAAAAGGCAACCTTGGAAACAAGGGATCAAGAAGAAAAACCGATTGGTATAAAAGTGACTGTGTTAGATCCTTGTTTTAACGAATTCTCGTTGTTTTTGAAGAAGTGGAACATGAAGACTACTAGCATTTATATTCTTCATCAAGATTGGACACATGTTTTGTTGGAGAATAAATTTAAAGAAAATCAAAAACTTGACATTTGGTCATTTAGGGTTAATGAAAAGTTATACCTTTTACTCAATAGCAATGAGTCACAAGAAATTGAAGAAAGTAAAGAGCTGAAGAATTCAACTGTGGTTTCGAAAACGAAGAAGAATGAAGATGCTAAAGAGTGA 870 0.3149 MLQKKAMAIEKKINAYMQQLKTMEKKFDPLPHFTLHRVLSQISPQFYTKDELTQIEKINHILSEETNLSLISQSNVKKVEVNDEKSCCPSNKDIIFDEGRRVKPKSAIRRKPIIHKKEILLSPPPELPSHVNDMIKVLNGSDIKYIMCKELFKSDLNNNLNRLSMPITQIKSDFLTEIEKATLETRDQEEKPIGIKVTVLDPCFNEFSLFLKKWNMKTTSIYILHQDWTHVLLENKFKENQKLDIWSFRVNEKLYLLLNSNESQEIEESKELKNSTVVSKTKKNEDAKE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01824 289 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 43 260 IPR005508 GO:0003677
Vifa4g01824 289 MobiDBLite consensus disorder prediction 264 289 - -
Vifa4g01824 289 SUPERFAMILY DNA-binding pseudobarrel domain 145 262 IPR015300 -
Vifa4g01824 289 Gene3D - 136 273 IPR015300 -
Vifa4g01824 289 MobiDBLite consensus disorder prediction 263 289 - -
Vifa4g01824 289 Coils Coil 6 26 - -
Vifa4g01824 289 Pfam B3 domain-containing protein At2g31720-like 127 232 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01824 Vifa-Chr4 517577312 517578181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01824 126 258 B3 DNA Binding Superfamily AT1G05930 25.185 8.28e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01824 - - psat:127101787 358.992