Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01822 ATGTCCATAAAGAACACTGCAGTTTTACAAAATCCAGAAGTGATGTTGCAAAAGAAAGCTATGGCTATTGAGAAGAAGATCAATGCATATATGCAACAGTTGAAAACAATGGAAAAGAAATTTGATCCATTACCTCATTTTACTTTGCATAGAGTGTTATCTCAAATTTCTCCACAATTTTATACTAAAGATGAGTTAACCCAAATTGAAAAAATCAATCACATTTTGAGTGAAGAAACAAATCTCTCTCTTATTTCACAAAGTAATGTGAAAAAAGTAGAAGTCAATGATGAAAAAAGTTGTTGTCCAAGTAATAAAGATATCATCTTTGATGAAGGTAGAAGAGTGAAACCAAAATCAGCAATTAGGAGGAAACCAATAATTCACAAAAAAGAAATTTTGTTGTCACCGCCACCAGAATTGCCTAGTCATGTTAATGACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGTAAGGAATTGTTTAAGTCAGATCTCAACAATAATCTCAATCGTCTTTCAATGCCAATTACACAAATCAAATCTGATTTCCTCACAGAAATAGAAAAGGCAACCTTGGAAACAAGGGATCAAGAAGAAAAACCGATTGGTATAAAAGTGACTGTGTTAGATCCTTGTTTTAACGAATTCTCGTTGTTTTTGAAGAAGTGGAACATGAAGACTACTAGCATTTATATTCTTCATCAAGATTGGACACATGTTTTGTTGGAGAATAAATTTAAAGAAAATCAAAAACTTGACATTTGGTCATTTAGGGTTAATGAAAAGTTATACCTTTTACTCAATAGCAATGAGTCACAAGAAATTGAAGAAAGTAAAGAGCTGAAGAATTCAACCGTGGTTTCGAAAACGAAGAAGAATGAAGATGCTAAAGAGTGA 912 0.318 MSIKNTAVLQNPEVMLQKKAMAIEKKINAYMQQLKTMEKKFDPLPHFTLHRVLSQISPQFYTKDELTQIEKINHILSEETNLSLISQSNVKKVEVNDEKSCCPSNKDIIFDEGRRVKPKSAIRRKPIIHKKEILLSPPPELPSHVNDMIKVLNGSDIKYIMCKELFKSDLNNNLNRLSMPITQIKSDFLTEIEKATLETRDQEEKPIGIKVTVLDPCFNEFSLFLKKWNMKTTSIYILHQDWTHVLLENKFKENQKLDIWSFRVNEKLYLLLNSNESQEIEESKELKNSTVVSKTKKNEDAKE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01822 303 Pfam B3 domain-containing protein At2g31720-like 141 246 IPR005508 GO:0003677
Vifa4g01822 303 Gene3D - 150 286 IPR015300 -
Vifa4g01822 303 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 57 274 IPR005508 GO:0003677
Vifa4g01822 303 MobiDBLite consensus disorder prediction 278 303 - -
Vifa4g01822 303 SUPERFAMILY DNA-binding pseudobarrel domain 159 276 IPR015300 -
Vifa4g01822 303 MobiDBLite consensus disorder prediction 277 303 - -
Vifa4g01822 303 Coils Coil 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01822 Vifa-Chr4 517409249 517410160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01822 140 272 B3 DNA Binding Superfamily AT1G05930 25.185 8.59e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01822 - - psat:127101787 365.155