Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01786 ATGTTGGATAGGATTGAAGAGGGAAGTGTGAGGTTGTTGGGAAGCAATAGTGGTGGAAGTAGTGAGTCTAGGTGGGTTGATGGAAGTGAAGTTGATTGGGATGAAGATCCTCCCTGGTCTACTAAGAGCAAGGGAAGTGATGGGAGAGAAGGGTATGGTTCAATTAGGAGGAGGCTTGTTAAGAAACCTAAAAGGGTTGATTCTTTTGATGTTGAAGCTATGGAGATTTCTGCAGCTCATGATCAACACTCCAAGGACCTTTCCCTTTGGTCTACCATTGCGTTGGCATTTCAAACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTTTATGTTTTTGCTGATGTCTTCAGCAAGGTTCCTATTAACTCAGACGACGATGTCTTGGGGGCGTTATCGTTAGTAATGTACACGATAGCGCTTATTCCGTTAGCAAAATATGTTTTCATAGTTCTCAAAGCTAATGATAATGGAGAAGGAGGAACGTTTGCGCTATACTCGCTGATTTGTAGGTATGCGAATGTGAATCTGCTTCCGAATCGCCAACAAGCTGATGAACAAATCTCTAGTTTTAGGCTCAAACTTCCAACTCCAGAACTCCAAAGGGCTTTAAAAATAAAGGAGACTTTGGAAAAGACGTCGATTTTGAAGAACGTGTTGTTAGTGTTGGTTCTTATCGGAACTTCCATGATCATCGGAGATGGTATTCTAACTCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAATAGACGGATTCGGTACAAGTGAAGTGGTTAGTATATCTATTGTAGTCCTGGTGGCTTTGTTCAACATTCAACGATTTGGTACCGCTAAAAATAACGGAAAACGTGCGTGGTCTGCTCTTGGAGGTTGTGTTCTTTGCATTACAGGCGCGGAAGCAATGTTTGCAGATCTAGGACATTTTACTGTACCGTCGATACAGATTGCCTTCACTTTTGTGGTGTTTCCATGTCTCCTTCTGGCCTATATGGGACAAGCTGCATTTCTGATGAAAAACCCCGCTTTGTATTCAAGCGTATTCTACAAATCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTCGTTATAGCTACGCTCGGTGCTATGATTGCAAGCCAAGCAATGATATCGGCTACATTTTCGTGTGTTAAGCAATCAATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCAAAAAAGTTCATGGGTCAAATTTACGTCCCCGTCATAAATTGGTTTCTGATGATCATGTGCATCATTGTCGTTTACATCTTCAAAAGCACTACCGATATCGCAAATGCTTACGGCATTGCTGAAGTTGGTGTTATGATGGTTAGCACCACATTGGTGACACTAGTTATGCTTTTAGTTTGGCAAACAAACTTGTTTCTCGCATTTTCTTTCCTACTTGTGTTCGGTTCTGTGGAGCTTATTTACATGTCTTCGGTCCTATCAAAAATCTTCGAAGGCGGCTGGCTTCCACTCGCCTTCGCTACCTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGAAGTGTATTGAAGTATCGAAGGGAAGTCAGAGAAAAAATTTCAATGGACTTAATGCTCGATCTTAGTTCCAATCTCGGAACAGTAAGAGTTCCCGGAATAGGTTTGCTGTATAACGAGCTTGTTCAAGTTTTTGTCTGCATTAAATATGTTCCGATTCCCGTGGTTCCTCAAGAAGAAAGATTTTTATTCCGAAGAGTTTGTCCGAAAGACTACCATATGTTCCGCTGCGTTGCACGGTACGGTTACAAAGACAGTCGCAAAGAAGATCACCGTGCATTTGAGCAACTTCTTATTGAAAGCCTTGAGAAATTCTTGAGAAAGGAAGCACTAGAAGCTGCGCTGGAGGATATTGACGACTTGGACAGCGTCTCGGCGGATACAAGAATTTCTGATCTTACGCCCGATACTGCGGTCGACGAGCTTAAGATTCCACTAATGCATGGTCAGAATTTGGAAGAAACAGGAACCTCGTCCTCTCGTGAAGCTTCGTTGACAGTACTACCGTCTAGTTACATGTCGATGGAGGAAGATCCTAGTCTTGAATACGAGCTTTCGGCTCTTAGAGAAGCGATGGATTCGGGATTCACTTATTTGCTTGGTCATGGAGATGTGAGGGCAAAGAAGGACTCATTTTTCTTTAAGAAATTGATGATAAACTATTTCTATGCATTTCTAAGAAAGAATTGCAGAGGAGGTACTGCAAATATGAAAGTACCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTCTGA 2319 0.4256 MLDRIEEGSVRLLGSNSGGSSESRWVDGSEVDWDEDPPWSTKSKGSDGREGYGSIRRRLVKKPKRVDSFDVEAMEISAAHDQHSKDLSLWSTIALAFQTLGVVYGDMGTSPLYVFADVFSKVPINSDDDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFRLKLPTPELQRALKIKETLEKTSILKNVLLVLVLIGTSMIIGDGILTPAISVMSAISGLQDQIDGFGTSEVVSISIVVLVALFNIQRFGTAKNNGKRAWSALGGCVLCITGAEAMFADLGHFTVPSIQIAFTFVVFPCLLLAYMGQAAFLMKNPALYSSVFYKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYVPVINWFLMIMCIIVVYIFKSTTDIANAYGIAEVGVMMVSTTLVTLVMLLVWQTNLFLAFSFLLVFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRREVREKISMDLMLDLSSNLGTVRVPGIGLLYNELVQVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDSRKEDHRAFEQLLIESLEKFLRKEALEAALEDIDDLDSVSADTRISDLTPDTAVDELKIPLMHGQNLEETGTSSSREASLTVLPSSYMSMEEDPSLEYELSALREAMDSGFTYLLGHGDVRAKKDSFFFKKLMINYFYAFLRKNCRGGTANMKVPHTNIIQVGMTYMV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01786 772 MobiDBLite consensus disorder prediction 27 51 - -
Vifa4g01786 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 285 770 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g01786 772 MobiDBLite consensus disorder prediction 1 51 - -
Vifa4g01786 772 Pfam K+ potassium transporter 286 560 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g01786 772 Pfam K+ potassium transporter 96 285 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01786 Vifa-Chr4 507560501 507563894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01786 2 772 Inorganic Solute Cotransporters AT1G60160 67.853 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01786 K03549 - gmx:100814419 1233.39