Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01785 ATGTTGGATAGGATTGAAGAGGGAAGTGTGAGGTTGTTGGGAAGCAATAGTGGTGGAAGTAGTGAGTCTAGGTGGGTTGATGGAAGTGAAGTTGATTGGGATGAAGATCCTCCCTGGTCTACTAAGAGCAAGGGAAGTGATGGGAGAGAAGGGTATGGTTCAATTAGGAGGAGGCTTGTTAAGAAACCTAAAAGGGTTGATTCTTTTGATGTTGAAGCTATGGAGATTTCTGCAGCTCATGATCAACACTCCAAGGACCTTTCCCTTTGGTCTACCATTGCGTTGGCATTTCAAACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTTTATGTTTTTGCTGATGTCTTCAGCAAGGTTCCTATTAACTCAGACGACGATGTCTTGGGGGCGTTATCGTTAGTAATGTACACGATAGCGCTTATTCCGTTAGCAAAATATGTTTTCATAGTTCTCAAAGCTAATGATAATGGAGAAGGAGGAACGTTTGCGCTATACTCGCTGATTTGTAGGTATGCGAATGTGAATCTGCTTCCGAATCGCCAACAAGCTGATGAACAAATCTCTAGTTTTAGGCTCAAACTTCCAACTCCAGAACTCCAAAGGGCTTTAAAAATAAAGGAGACTTTGGAAAAGACGTCGATTTTGAAGAACGTGTTGTTAGTGTTGGTTCTTATCGGAACTTCCATGATCATCGGAGATGGTATTCTAACTCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAATAGACGGATTCGGTACAAGTGAAGTGGTTAGTATATCTATTGTAGTCCTGGTGGCTTTGTTCAACATTCAACGATTTGGTACCGCTAAAGTGGGTTTCATGTTTGCCCCTGTACTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGACTGTATAACATGCTTAAATATGATATTACTGTTGTGAGAGCACTCAACCCAGCATATATCTATTATTTCTTCAAGAATAACGGAAAACGTGCGTGGTCTGCTCTTGGAGGTTGTGTTCTTTGCATTACAGGCGCGGAAGCAATGTTTGCAGATCTAGGACATTTTACTGTACCGTCGATACAGATTGCCTTCACTTTTGTGGTGTTTCCATGTCTCCTTCTGGCCTATATGGGACAAGCTGCATTTCTGATGAAAAACCCCGCTTTGTATTCAAGCGTATTCTACAAATCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTCGTTATAGCTACGCTCGGTGCTATGATTGCAAGCCAAGCAATGATATCGGCTACATTTTCGTGTGTTAAGCAATCAATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCAAAAAAGTTCATGGGTCAAATTTACGTCCCCGTCATAAATTGGTTTCTGATGATCATGTGCATCATTGTCGTTTACATCTTCAAAAGCACTACCGATATCGCAAATGCTTACGGCATTGCTGAAGTTGGTGTTATGATGGTTAGCACCACATTGGTGACACTAGTTATGCTTTTAGTTTGGCAAACAAACTTGTTTCTCGCATTTTCTTTCCTACTTGTGTTCGGTTCTGTGGAGCTTATTTACATGTCTTCGGTCCTATCAAAAATCTTCGAAGGCGGCTGGCTTCCACTCGCCTTCGCTACCTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGAAGTGTATTGAAGTATCGAAGGGAAGTCAGAGAAAAAATTTCAATGGACTTAATGCTCGATCTTAGTTCCAATCTCGGAACAGTAAGAGTTCCCGGAATAGGTTTGCTGTATAACGAGCTTGTTCAAGGTATTCCCTCGATTTTTCTGCAGTTTCTTCTAAACCTTCCGGCTCTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTTCCGATTCCCGTGGTTCCTCAAGAAGAAAGATTTTTATTCCGAAGAGTTTGTCCGAAAGACTACCATATGTTCCGCTGCGTTGCACGGTACGGTTACAAAGACAGTCGCAAAGAAGATCACCGTGCATTTGAGCAACTTCTTATTGAAAGCCTTGAGAAATTCTTGAGAAAGGAAGCACTAGAAGCTGCGCTGGAGGATATTGACGACTTGGACAGCGTCTCGGCGGATACAAGAATTTCTGATCTTACGCCCGATACTGCGGTCGACGAGCTTAAGATTCCACTAATGCATGGTCAGAATTTGGAAGAAACAGGAACCTCGTCCTCTCGTGAAGCTTCGTTGACAGTACTACCGTCTAGTTACATGTCGATGGAGGAAGATCCTAGTCTTGAATACGAGCTTTCGGCTCTTAGAGAAGCGATGGATTCGGGATTCACTTATTTGCTTGGTCATGGAGATGTGAGGGCAAAGAAGGACTCATTTTTCTTTAAGAAATTGATGATAAACTATTTCTATGCATTTCTAAGAAAGAATTGCAGAGGAGGTACTGCAAATATGAAAGTACCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTCTGA 2514 0.4228 MLDRIEEGSVRLLGSNSGGSSESRWVDGSEVDWDEDPPWSTKSKGSDGREGYGSIRRRLVKKPKRVDSFDVEAMEISAAHDQHSKDLSLWSTIALAFQTLGVVYGDMGTSPLYVFADVFSKVPINSDDDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFRLKLPTPELQRALKIKETLEKTSILKNVLLVLVLIGTSMIIGDGILTPAISVMSAISGLQDQIDGFGTSEVVSISIVVLVALFNIQRFGTAKVGFMFAPVLALWFFSLGSIGLYNMLKYDITVVRALNPAYIYYFFKNNGKRAWSALGGCVLCITGAEAMFADLGHFTVPSIQIAFTFVVFPCLLLAYMGQAAFLMKNPALYSSVFYKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYVPVINWFLMIMCIIVVYIFKSTTDIANAYGIAEVGVMMVSTTLVTLVMLLVWQTNLFLAFSFLLVFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRREVREKISMDLMLDLSSNLGTVRVPGIGLLYNELVQGIPSIFLQFLLNLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDSRKEDHRAFEQLLIESLEKFLRKEALEAALEDIDDLDSVSADTRISDLTPDTAVDELKIPLMHGQNLEETGTSSSREASLTVLPSSYMSMEEDPSLEYELSALREAMDSGFTYLLGHGDVRAKKDSFFFKKLMINYFYAFLRKNCRGGTANMKVPHTNIIQVGMTYMV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01785 837 NCBIfam potassium uptake protein 95 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g01785 837 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g01785 837 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 85 835 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g01785 837 MobiDBLite consensus disorder prediction 27 51 - -
Vifa4g01785 837 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01785 Vifa-Chr4 507560501 507563894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01785 2 837 Inorganic Solute Cotransporters AT1G60160 74.021 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01785 K03549 - gmx:100814419 1390.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01785 4 507560501 507563894 Vifa4g01785 4 507560501 507563894 ECH