Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01783 ATGGCATCAAGATCCTATGCTAATCTCTTAGACTTAGCTGGTGGAGGAGACTTGCTTGATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTGAATCAGACGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCTCTGCAGGCTAAAAGAGATATTGATACCGCTAAATGGTGTTTCAGTTGGGATGAAGATTCAATTCTATTACAACTTAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCTCTCAAAGCAGAGATAGATGCTAGTGAGCAGGATGAAGTTGCTCAGAAATTACTGGATGACTTTAATTGTGTGCCTACCTTTCTACCACATGATCTGCAGAAAAAGTTTTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCACTGTTCCATTATATGCTACCCATATGCTCAGATCACGGTGATCGCTTTGACCGTGTGCTTTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTAATCCTGATGATGATTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTTAATCGAGTTAAACTTGGGTTCTTTCTTCACAGTCCTTTCCCATCTTCCGAAATTTACCGAACTTTGCCTTAG 717 0.4059 MASRSYANLLDLAGGGDLLDIPHTPRTLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKAEIDASEQDEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01783 238 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 238 IPR001830 GO:0003824|GO:0005992
Vifa4g01783 238 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 238 - -
Vifa4g01783 238 FunFam Trehalose-6-phosphate synthase 8 50 238 - -
Vifa4g01783 238 Gene3D Glycogen Phosphorylase B; 45 238 - -
Vifa4g01783 238 Pfam Glycosyltransferase family 20 55 238 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01783 Vifa-Chr4 506360825 506361633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01783 1 238 Trehalose Biosynthesis Gene Families AT1G70290 75.620 1.94e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01783 K16055 - gmx:100775779 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01783 4 506360825 506361633 Vifa4g01783 4 506360825 506361633 ECH