Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01763 ATGAATGAAGAGCCTACACCAGCTATCCTCATGCCTCTCTCTTGCGTCTCAGATTGTGACGTCCTCTGCGGAGAGGACACATCCGAAATCCTCACCGGAGAGTCAACGGAATACTCCTCCGATCTCGAGTCATCGTCGCCGTTGTCGTCATTATTCGTGGAGGAGGAAGAGTCCATTGCCGTATTCATCGAACACGAGCGTAAGTTCGTCCCTGGATTCGATTACCTCTCGAGATTCCAGTCTTGTTCTCTAGATACCAACGCTAGAGAAGAATCCGTTGCATGGATTCTCAAGGTACATGCGTACTATGGTTTTCAGCCGTTGACGGGGTACCTTTCTGTTAACTATATGGATCGGTTTTTAGATTCTCGAACTTTACCGGAATCAAATGGATGGCCTCTGCAACTTTTATCAGTTGCGTGTTTGTCTTTAGCAGCAAAGATGGAGGAACCCCTTGTTCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTCAACCGAGAACGATATTAAGAATGGAGCTACTTGTTCTAACTGTGTTGGATTGGAGGCTTAGATCAGTCACCCCACTTAGCTTCCTTAGTTTCTTTGCATGCAAACTAGATTCAACTGGAGCATTCACTGACTTCCTTATTTCACGTGCTACAGAAATCATCTTATCTAATATCCAAGAAGCTGGCTTTCTTGCCTACAGGCCATCATGCATTGCTGCAGCTGCAATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTTTGTTAAGCCTGAACATGCTGAGTCATGGTGTGAGGGCCTAAGAAAAGAAAATATTATAGGGTGCTATGAGTTGATGCAAGAAATTGTCATAAGCAATAACCAAAGAAATCCACCTAAAGTGTTGCCACAGCTGCGAGTTACAACTCGAACCCGAAGGTGGTCCAATGTTTCATCATCATCTTCATCTCCATCTTCCTCCTCTTCACTCTCTTTCTCATTATCTTATAAAAAAAGGAAATTAAATAGTAACTGCTTCTGGGTAAATGATGACAAAGGAAACTCTGAGTGA 1056 0.4337 MNEEPTPAILMPLSCVSDCDVLCGEDTSEILTGESTEYSSDLESSSPLSSLFVEEEESIAVFIEHERKFVPGFDYLSRFQSCSLDTNAREESVAWILKVHAYYGFQPLTGYLSVNYMDRFLDSRTLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFQPRTILRMELLVLTVLDWRLRSVTPLSFLSFFACKLDSTGAFTDFLISRATEIILSNIQEAGFLAYRPSCIAAAAILSAANEIPNWSFVKPEHAESWCEGLRKENIIGCYELMQEIVISNNQRNPPKVLPQLRVTTRTRRWSNVSSSSSSPSSSSSLSFSLSYKKRKLNSNCFWVNDDKGNSE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01763 351 Gene3D - 72 189 - -
Vifa4g01763 351 SMART cyclin_7 94 182 IPR013763 -
Vifa4g01763 351 SUPERFAMILY Cyclin-like 54 188 IPR036915 -
Vifa4g01763 351 CDD CYCLIN_AtCycD-like_rpt2 191 281 - -
Vifa4g01763 351 Pfam Cyclin, C-terminal domain 191 300 IPR004367 -
Vifa4g01763 351 Pfam Cyclin, N-terminal domain 59 188 IPR006671 -
Vifa4g01763 351 Gene3D - 62 252 - -
Vifa4g01763 351 PANTHER CYCLINS 52 289 IPR039361 -
Vifa4g01763 351 SMART Cyclin_C_2 191 320 IPR004367 -
Vifa4g01763 351 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
Vifa4g01763 351 FunFam D2/4-type cyclin 72 189 - -
Vifa4g01763 351 SUPERFAMILY Cyclin-like 172 290 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01763 Vifa-Chr4 501380245 501383074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01763 11 350 Core Cell Cycle Gene Families AT1G70210 59.475 3.35e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01763 K18810 - gmx:100778578 502.286