Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01756 ATGGATCATCACATTATCCAAGAAATCAAGTACTATAAGAAGGACACTGAAGATCAACACATGTGGACGAGGGAGAGGTCTAAAGCAAGACAAGAAACAAAGATTATATTCTCTGCTATTGGAAGCAAAGATATATCTATGGGTGCTGAAGTTGGATTCAATACAACTTCTGCTTCATTCTCAAAATATAATGCTGGGATTGCCTTCAATAAACCAGATTTCTCTGCCACACTTATGCTGGCTGATAAAGGAGAGACCCTGAAGATTTACCATTGGGACTTCATAGTCAATAGATCCCAAAACAGTCTGAAGACTCGATTCAATGATGATGGATCAGCCCTTACTATGTATAAAAGCTTAATTGGTGATGTTCCCAATAATACGCACGGCGGGACTGGCCCCCCTTCAGTAGCGGATAAAAAAGGAAGTTATTCATCTGATGACGTTGAAGATGAGAGCTCAACAACCCCTTTACCGATCCTGCAAAACGACATCATAAAATAG 504 0.4008 MDHHIIQEIKYYKKDTEDQHMWTRERSKARQETKIIFSAIGSKDISMGAEVGFNTTSASFSKYNAGIAFNKPDFSATLMLADKGETLKIYHWDFIVNRSQNSLKTRFNDDGSALTMYKSLIGDVPNNTHGGTGPPSVADKKGSYSSDDVEDESSTTPLPILQNDIIK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01756 167 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 39 89 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vifa4g01756 167 MobiDBLite consensus disorder prediction 125 167 - -
Vifa4g01756 167 Gene3D Porin 28 98 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01756 Vifa-Chr4 499488051 499488641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01756 1 39 Primary Pumps ATPases AT1G17500 74.359 3.10e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01756 K15040 K01530 gmx:100790270 95.1301