Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01726 ATGCTCTCTTACACTTTGACAGCTTCACTAACTCAAAGTTTCGTTCACGTTCTCGTTCTTCCCGGAGAAGTTTCGTTCGGTCGCCGGCACCTTCATCAAAAACTCGCCTTGTCCTTCTTCCCCTGCTACAGGGGTAAAATGGAGATAACTGAGTGTCTCCAAAATGAAATTGAAGAACCCAAAGATATTTTTCTGGGTCAAATTGTAAGTAGCAAAGATCAAGCTTATGACTTGTATCAAGAGCATGCCTTCAAAATGGGTTTTAGTGTAAGAAAAGGGAGGGAGTTATACCATGATAATGAGAAAAAGAAAACGCGGTTAAAGGAGTTTTATTGTTCCAAACAAGGGTTCAAGAACAATGAACCTGACGGTGAAGTGGCTTATAAAAGACCAGATTCGAGAACAAATTGTTTAGCCATGGTGAGATTTAATGTGACTAAGGAAGGGGTGTGGAAAGTTACCAAGTTGATTTTGGATCACAATCATGAGTTTGTTCCGCTTGGGCAAAGATATTTGTTACGTTCTATGAGAAATTTGTCGAATCTTAGAGAAGATCGCATAAAGTCCTTGGTGAATGATGCCATTAAAGTTACAAGTATTGGGAGTTATTTAGGTGAAGAAGTTGGTGGATTTAAGAAACACGGTGTCATGTTGAAAGATATGCGGAGTTATGTTTGCATTGAAAAGTTGAAATGTAGTGACGCCAAAGATGCTCAATCTGTGTTGAATCACTTACAAAATAAACAAGCACAAGATTCTTTGTTCTATTACAGTGTACAGCTCGACCAAGAGTCACGTTTGACCAATGTCTTTTGGAGAGATGGTAAATCTAAAGTTGATTATAGTTGCTTTGGGGATGTTGTGGTTTTCGACACTACTTGTCTGAAGTTTCTTTTGCTTGGTTATTCAAGGCGTTTTTGGAGAGTATGGAAAACCAACAACCAAAAACAATCTTTACACTTCATGATCCAGCCATGGCTAAAGCGATTGGAGAGTAAATGCATGGAAGGTTGCGATTCTGAAGAAGAATTTCAAAGAACTTGGGATGAGATGATGAATGTGTATAAGCTTCAGGATCATCAATGGTTGAGCAATATGTATGAAATTCGTCATAAATGGAGCATTGCTTACAGCAAGTGTGTATTCTCTGCTGGTATCAAGTCTTGCCAAAGGATTGAGAGTACGAATAGTGTGTTAGGTGAGATTGTAGGGAAAACAACAACTCTCGCACAATTTTTAGTGGCATTTGAGAAGATGTTGAAAAAGTGGCACCGCTTAGAGGTTGAGGAGGAATTCAAAAATAACCAAAGTACACCTCCTCTTGTAATAAACATCAGTGAAACATTACGGCATGCATCTACGGTATATACTCACAAAACCTTTAATCTTTTTCTGAATGAGTACCTGGAAGGGACAGGTGGAAGCACTTCTATAGAGATTGGTCACTCCGATAGTGTGTCATATCATGAAGTCATGTTGAACCATATGCCTGATAAAAAATATGCGGTGACATTTGACTCTTCCAACATGAAGATTAGTTGTAGTTGCCACAAGTTTGATTCCATGGGCATTCTTTGTAGTCATGCTTTGCGGATTTATAACATTAAAGGTATTTTAAGAATACCTTACCAATACTTCTTACAAAGATGGTCAAAAAATGCAAGGTCGGTAATTTATGAGCACATAAATAGGGGCATGGGAGAAGATTCTACCTCCAATTCAGTGATTAATGTTGATGATGCTGGTATTCGATATCGCAATGCTATTTTGAAGTCATTCTACTCTCTAGTTTTGGAAAGTCAAGACAATAAAGAAGCTCAAAAACTTATGTGGAAATTACTTGATATTGGAGTTGAGAGAGTGCAAAAGTGTGTTGGCAAGGTCAATTTAAATTCCAATGAAGAAGCGATGGAGAAAAATTTCAACCAAATCGAGGAAATATGCTGCACACCGATGGTCTGA 1962 0.3818 MLSYTLTASLTQSFVHVLVLPGEVSFGRRHLHQKLALSFFPCYRGKMEITECLQNEIEEPKDIFLGQIVSSKDQAYDLYQEHAFKMGFSVRKGRELYHDNEKKKTRLKEFYCSKQGFKNNEPDGEVAYKRPDSRTNCLAMVRFNVTKEGVWKVTKLILDHNHEFVPLGQRYLLRSMRNLSNLREDRIKSLVNDAIKVTSIGSYLGEEVGGFKKHGVMLKDMRSYVCIEKLKCSDAKDAQSVLNHLQNKQAQDSLFYYSVQLDQESRLTNVFWRDGKSKVDYSCFGDVVVFDTTCLKFLLLGYSRRFWRVWKTNNQKQSLHFMIQPWLKRLESKCMEGCDSEEEFQRTWDEMMNVYKLQDHQWLSNMYEIRHKWSIAYSKCVFSAGIKSCQRIESTNSVLGEIVGKTTTLAQFLVAFEKMLKKWHRLEVEEEFKNNQSTPPLVINISETLRHASTVYTHKTFNLFLNEYLEGTGGSTSIEIGHSDSVSYHEVMLNHMPDKKYAVTFDSSNMKISCSCHKFDSMGILCSHALRIYNIKGILRIPYQYFLQRWSKNARSVIYEHINRGMGEDSTSNSVINVDDAGIRYRNAILKSFYSLVLESQDNKEAQKLMWKLLDIGVERVQKCVGKVNLNSNEEAMEKNFNQIEEICCTPMV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01726 653 Pfam SWIM zinc finger 500 532 IPR007527 GO:0008270
Vifa4g01726 653 ProSiteProfiles Zinc finger SWIM-type profile. 501 537 IPR007527 GO:0008270
Vifa4g01726 653 SMART 26again6 512 539 IPR006564 GO:0008270
Vifa4g01726 653 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Vifa4g01726 653 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 622 IPR031052 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa4g01726 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01726 - - lang:109330813 437.958