Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01723 ATGTCTTCATCGTCTTCTTTGTCCGGAGGAGCATTTAGGCTTCGTTGGGATGTGTTTTTGAGTTTCAGAGGTGAAGACACTCGCGAATGCTTCACCAAAAAACTATACGAATCTCTCCATGGTCAAGGAGTTCGTGCTTTCATGGACGACGAGGGTTTGGACCGTGGGGATCGTATAGATATCACTCTTCTTCAAGCTATTGATGATTCTGCTGCTTCCATTGTTATTATCTCTCGTAATTACGCTGACTCTCATTGGTGTCTCGATGAACTTGTCAGGATTTTTGAATGCAAGAGGCTTGTTATTCCCGTTTTCTACAAAGTTGATCCTTCTCATGTTAGGAAACAGTCCGGCCCTTTTCAAAAAGGTTTTACTGATCTTGAAAACAGATTTGGTAATCTTATGGTTTCCAAGTGGAGACATTCTATGAAGTTACTTGGTGGACTTGCTGGCTTTGTTTTCAATGACAGTTATGAAGGTCAGCTTGAAAATCTGATACACCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTCGCTGAGTTTCTAGTCGGACTCAATGAACGTGTTGACAAGGTCATACATCTGTTACAAGTTCAACCCAACAGCGTCAAAGTCTTAGGGTTATATGGGATGGGAGGTGTTGGTAAGACAACACTTGCCAAGGCTCTTTTCAATACTCTCGTTGCTCGCTTTGAGCGTAGATGTTTCGTTTCAAATGTGAGAAACTCCTCGTCTAAAGAGGGTGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTCAACAAGGAGCTCAGAGTTTTGTAAGTGATGTCAATGCCGGTATTGCTACTATCAAAAGAATAGTTCATGAAAATCCGGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAGCCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATAAAGGAAGCTGTATAATCATTACAACAAGGGACACGACTGCTTTGCCTGAAAAACATGTCAACCAGATGTATGAAGTCAAAGAATTGTATGATGAAGAAGCTCTACAATTATTCAGTTACCATGCTTTGAAGAAAAAGGACCCTCCACCAAGTTTTCTGGATCTTTCAAAGAAAATTGTATCTCTTACCGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTGTGAGAGAAGGAGGGTGGAGGAGTGGGAGGATGCTGTTGTGAAGCTGAGAACAATTCGACCCGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGACGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTCTTCAAATGGAAATGAAGCGCGGTGATGTGATTGATATATTGAGAGGTTGTGGGTTTAGAGGAGAGATAGCTATGACCATCCTTGTACAGAAATGCTTAATCAAAATAAAACATGACAATACCTTGTGGATGCATGATCAAATTAGAGACATGGGAAGACAAATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGACTGTGGGATCGTGCTGAAATCATGTCCGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAATTGTACTGGACTTTAAGAAAAGATCAATCATTGTAGCAGAGAAATATAACTATGTTACACTTGATACAAAATCCTTTGAACCAATGGTTACATTACGATTGCTTCAGATCAATAATATGAGTTTGGAAGGCGAGTTTCTTCCCGATGAACTGAAATGGCTACAATGGCAAGGATGTCCTTTGGAATGCATTCCTTTGGACACATTGCCACGTGAACTGGCTATCCTTGATCTCTCAAATGCTGAGAAAATTAAAAGCTTGAGTGCATTGGAAAGTCACAACAAGCAGGTTCCAGAGAACCTATTGGTCATTAACCTCTCCGACTGCTACCAACTTGCTGCGATCCCTGATTTATCTGGGTGTCTCAAGCTAGAGAAAATTATTATGGAGAATTGCATTAATCTAAAATGGATTCATGAATCAATTGGCAGTTTGACTACCTTGCGTAATTTGAATTTGAGGCGTTGTAAAATCATCACTGAGCTTCCCAGTGATGTGTCTGGGCTGAAACATCTGGAGATCCTAGTTCTTTCTAGTTGCACCAATTTGAAAGTATTACCCGAAAACATAGGCATACTTAAATCGCTGAAAACACTTGAGGCTGATGGCACTGCTATAGTAAAGTTGCCCAAGTCCATTTTTCGCTTGACCAAACTCGAACGACTTGTTTTAGACAGTTGCTCATATTTGGGAAGACTGCCAAACTGCATTGGAAAATTATGTTCTTTGCAAGAATTATCTCTTAATCAATCAGGTTTACAAGAATTACCCAAAACTATTGGATATTTGAAAAACCTTGAGAAATTAAGTTTGAATTGGTGTGCATCTCTCACTCAGTTGCCAGATTCTATTGGAAATCTCGTATCGTTGACAAAGCTTTTGGCTTACAACAGTGGAATTAAAGAACTCCCTTCCACCATTGGTTCTTTATCCTTTCTGAGAACATTATCAGTTGGAAACAGTAAACGTCTCAGTAAATTGCCTGATTCAATTAAAACTCTGGCCTCAATTATTGAACTTGAGTTAGATGGAACACCCATCAAATATCTTCCAGATCAAATTGGAGAAATGAAACAACTAAGGAAGCTTGATATTGGGAATTGCAGCAATCTTGAATCATTACCAAAATTCATTGGCCACCTAGGATCTCTTACTTCGCTGAACATAAACAACGGAAATATCAAAGAATTACCAGTGTCAATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACACCTCCCAGCTTCTATAGGAAAATTGAAATCTCTATGTCACTTAAAGATGGAGGAAACAGCTATGTTTGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGATCACTGAGAATGGCAAAGAGGCCTGCTTCAGTTCCCATATCTGTGGAGAACACTGGCTCTTTTGTGATACCGTCTTCTTTTTGCAATCTGACCTTACTATATGAGTTCGATGCCCGTTCTTGGGGGTTATCTGGGAAAATTCCTGATGAATTCGAGAAGCTATCATTTATAGAGACTTTAAATTTGGGTCAAAACAATTTCCATAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTCAAGAAACTCTTACTTCCGAATTGCATGGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAACGCTGATAATTGTTATGCATTAGAAACTATACACAACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAGCTCACAAACTGTGAGAAAGTGGCGGATATTCCAGGTCTTGAATGCTTGAAATCCTTGAGAAGATTGTTCCTTAGTGGTTGCAATGCATGCTCCTCCAAAGCACGCAAAGGACTTTCAAAGGTTGCACTGAGAAATCTTCAGAACTTGAGCATGCCAGGAACCAAGTTACCTGAATGGTTTTCTGGAGGAACTGTCAGCTTTTCCAAGCACAAAAATCTTGAGCTAACAAGTGTAGTTGTAGGTGTTAATTTCTCAATTAACCATAACAATATGAATATTGAAACACCTGGAGTGGTTGATGTTCAAGCAAATGTTTTCAAATCGGGCAAACAAATATTTAGTTCAGGGCTAAACATATGGGGAGTGCCAAGGACAGATGAACCACACATACAGTTGCAAAGGTTCCATGATTACCATCCATTGGTAGCCTTCTTAAAAGACGCTGATACGGTTAGTGTGACAAAGAGGAGTCCTCCTTTTGATGAGAGGTTTGAATTGATAAAATGTGGAATTCATCTAATCTATGAAGGGGATGATGATTATGAGGGAGACGAAGAATCGCTGGACCAAGGGTTACAATCTGTCTCAGAAAGGTGTATGTCCGGTGTTGAAAGAAGAGATTGA 3987 0.395 MSSSSSLSGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHGQGVRAFMDDEGLDRGDRIDITLLQAIDDSAASIVIISRNYADSHWCLDELVRIFECKRLVIPVFYKVDPSHVRKQSGPFQKGFTDLENRFGNLMVSKWRHSMKLLGGLAGFVFNDSYEGQLENLIHLLVKRVLKELSNTPMVVAEFLVGLNERVDKVIHLLQVQPNSVKVLGLYGMGGVGKTTLAKALFNTLVARFERRCFVSNVRNSSSKEGGLLSLQSNIIKDLSSQQGAQSFVSDVNAGIATIKRIVHENPVLLVLDDVDNVSQLDALIGKREWFYKGSCIIITTRDTTALPEKHVNQMYEVKELYDEEALQLFSYHALKKKDPPPSFLDLSKKIVSLTGRMPLALEVFGCFLCERRRVEEWEDAVVKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFLQMEMKRGDVIDILRGCGFRGEIAMTILVQKCLIKIKHDNTLWMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKKRSIIVAEKYNYVTLDTKSFEPMVTLRLLQINNMSLEGEFLPDELKWLQWQGCPLECIPLDTLPRELAILDLSNAEKIKSLSALESHNKQVPENLLVINLSDCYQLAAIPDLSGCLKLEKIIMENCINLKWIHESIGSLTTLRNLNLRRCKIITELPSDVSGLKHLEILVLSSCTNLKVLPENIGILKSLKTLEADGTAIVKLPKSIFRLTKLERLVLDSCSYLGRLPNCIGKLCSLQELSLNQSGLQELPKTIGYLKNLEKLSLNWCASLTQLPDSIGNLVSLTKLLAYNSGIKELPSTIGSLSFLRTLSVGNSKRLSKLPDSIKTLASIIELELDGTPIKYLPDQIGEMKQLRKLDIGNCSNLESLPKFIGHLGSLTSLNINNGNIKELPVSIGLLENLVTLTLNKCRMLKHLPASIGKLKSLCHLKMEETAMFDLPESFGMLSSLRSLRMAKRPASVPISVENTGSFVIPSSFCNLTLLYEFDARSWGLSGKIPDEFEKLSFIETLNLGQNNFHSLPSSLKGLSFLKKLLLPNCMELTSLPSLPSSLIELNADNCYALETIHNMSNLESLEELKLTNCEKVADIPGLECLKSLRRLFLSGCNACSSKARKGLSKVALRNLQNLSMPGTKLPEWFSGGTVSFSKHKNLELTSVVVGVNFSINHNNMNIETPGVVDVQANVFKSGKQIFSSGLNIWGVPRTDEPHIQLQRFHDYHPLVAFLKDADTVSVTKRSPPFDERFELIKCGIHLIYEGDDDYEGDEESLDQGLQSVSERCMSGVERRD 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01723 1328 Gene3D Ribonuclease Inhibitor 725 997 IPR032675 -
Vifa4g01723 1328 Gene3D - 14 176 IPR035897 -
Vifa4g01723 1328 SUPERFAMILY L domain-like 490 889 - -
Vifa4g01723 1328 Gene3D Ribonuclease Inhibitor 540 724 IPR032675 -
Vifa4g01723 1328 Pfam TIR domain 16 157 IPR000157 GO:0007165
Vifa4g01723 1328 Gene3D Ribonuclease Inhibitor 998 1200 IPR032675 -
Vifa4g01723 1328 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 151 IPR035897 -
Vifa4g01723 1328 CDD ABC_ATPase 197 331 - -
Vifa4g01723 1328 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 820 IPR044974 GO:0006952
Vifa4g01723 1328 PRINTS Disease resistance protein signature 893 909 - -
Vifa4g01723 1328 PRINTS Disease resistance protein signature 211 226 - -
Vifa4g01723 1328 PRINTS Disease resistance protein signature 383 397 - -
Vifa4g01723 1328 PRINTS Disease resistance protein signature 290 304 - -
Vifa4g01723 1328 Gene3D - 348 433 IPR042197 -
Vifa4g01723 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Vifa4g01723 1328 Gene3D - 177 343 IPR027417 -
Vifa4g01723 1328 Pfam NB-ARC domain 193 417 IPR002182 GO:0043531
Vifa4g01723 1328 ProSiteProfiles TIR domain profile. 14 157 IPR000157 GO:0007165
Vifa4g01723 1328 SMART till_3 15 149 IPR000157 GO:0007165
Vifa4g01723 1328 SMART LRR_typ_2 731 754 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 825 848 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 1047 1069 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 683 707 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 919 942 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 872 895 IPR003591 -
Vifa4g01723 1328 SMART LRR_typ_2 778 801 IPR003591 -
Vifa4g01723 1328 SUPERFAMILY L domain-like 862 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01723 Vifa-Chr4 488760798 488766065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01723 16 884 WRKY Transcription Factor Family AT4G12020 29.003 1.36e-75 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01723 - - mtr:11408681 1994.55