Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01722 ATGATGTCTTCATCGTCTTCTTTGTCCGGAGGAGCATTTAGGCTTCGTTGGGATGTGTTTTTGAGTTTCAGAGGTGAAGACACTCGCGAATGCTTCACCAAAAAACTATACGAATCTCTCCATGGTCAAGGAGTTCGTGCTTTCATGGACGACGAGGGTTTGGACCGTGGGGATCGTATAGATATCACTCTTCTTCAAGCTATTGATGATTCTGCTGCTTCCATTGTTATTATCTCTCGTAATTACGCTGACTCTCATTGGTGTCTCGATGAACTTGTCAGGATTTTTGAATGCAAGAGGCTTGTTATTCCCGTTTTCTACAAAGTTGATCCTTCTCATGTTAGGAAACAGTCCGGCCCTTTTCAAAAAGGTTTTACTGATCTTGAAAACAGATTTGGTAATCTTATGGTTTCCAAGTGGAGACATTCTATGAAGTTACTTGGTGGACTTGCTGGCTTTGTTTTCAATGACAGTTATGAAGGTCAGCTTGAAAATCTGATACACCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTCGCTGAGTTTCTAGTCGGACTCAATGAACGTGTTGACAAGGTCATACATCTGTTACAAGTTCAACCCAACAGCGTCAAAGTCTTAGGGTTATATGGGATGGGAGGTGTTGGTAAGACAACACTTGCCAAGGCTCTTTTCAATACTCTCGTTGCTCGCTTTGAGCGTAGATGTTTCGTTTCAAATGTGAGAAACTCCTCGTCTAAAGAGGGTGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTCAACAAGGAGCTCAGAGTTTTGTAAGTGATGTCAATGCCGGTATTGCTACTATCAAAAGAATAGTTCATGAAAATCCGGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAGCCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATAAAGGAAGCTGTATAATCATTACAACAAGGGACACGACTGCTTTGCCTGAAAAACATGTCAACCAGATGTATGAAGTCAAAGAATTGTATGATGAAGAAGCTCTACAATTATTCAGTTACCATGCTTTGAAGAAAAAGGACCCTCCACCAAGTTTTCTGGATCTTTCAAAGAAAATTGTATCTCTTACCGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTGTGAGAGAAGGAGGGTGGAGGAGTGGGAGGATGCTGTTGTGAAGCTGAGAACAATTCGACCCGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGACGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTCTTCAAATGGAAATGAAGCGCGGTGATGTGATTGATATATTGAGAGGTTGTGGGTTTAGAGGAGAGATAGCTATGACCATCCTTGTACAGAAATGCTTAATCAAAATAAAACATGACAATACCTTGTGGATGCATGATCAAATTAGAGACATGGGAAGACAAATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGACTGTGGGATCGTGCTGAAATCATGTCCGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAATTGTACTGGACTTTAAGAAAAGATCAATCATTGTAGCAGAGAAATATAACTATGTTACACTTGATACAAAATCCTTTGAACCAATGGTTACATTACGATTGCTTCAGATCAATAATATGAGTTTGGAAGGCGAGTTTCTTCCCGATGAACTGAAATGGCTACAATGGCAAGGATGTCCTTTGGAATGCATTCCTTTGGACACATTGCCACGTGAACTGGCTATCCTTGATCTCTCAAATGCTGAGAAAATTAAAAGCTTGAGTGCATTGGAAAGTCACAACAAGGTTCCAGAGAACCTATTGGTCATTAACCTCTCCGACTGCTACCAACTTGCTGCGATCCCTGATTTATCTGGGTGTCTCAAGCTAGAGAAAATTATTATGGAGAATTGCATTAATCTAAAATGGATTCATGAATCAATTGGCAGTTTGACTACCTTGCGTAATTTGAATTTGAGGCGTTGTAAAATCATCACTGAGCTTCCCAGTGATGTGTCTGGGCTGAAACATCTGGAGATCCTAGTTCTTTCTAGTTGCACCAATTTGAAAGTATTACCCGAAAACATAGGCATACTTAAATCGCTGAAAACACTTGAGGCTGATGGCACTGCTATAGTAAAGTTGCCCAAGTCCATTTTTCGCTTGACCAAACTCGAACGACTTGTTTTAGACAGTTGCTCATATTTGGGAAGACTGCCAAACTGCATTGGAAAATTATGTTCTTTGCAAGAATTATCTCTTAATCAATCAGGTTTACAAGAATTACCCAAAACTATTGGATATTTGAAAAACCTTGAGAAATTAAGTTTGAATTGGTGTGCATCTCTCACTCAGTTGCCAGATTCTATTGGAAATCTCGTATCGTTGACAAAGCTTTTGGCTTACAACAGTGGAATTAAAGAACTCCCTTCCACCATTGGTTCTTTATCCTTTCTGAGAACATTATCAGTTGGAAACAGTAAACGTCTCAGTAAATTGCCTGATTCAATTAAAACTCTGGCCTCAATTATTGAACTTGAGTTAGATGGAACACCCATCAAATATCTTCCAGATCAAATTGGAGAAATGAAACAACTAAGGAAGCTTGATATTGGGAATTGCAGCAATCTTGAATCATTACCAAAATTCATTGGCCACCTAGGATCTCTTACTTCGCTGAACATAAACAACGGAAATATCAAAGAATTACCAGTGTCAATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACACCTCCCAGCTTCTATAGGAAAATTGAAATCTCTATGTCACTTAAAGATGGAGGAAACAGCTATGTTTGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGATCACTGAGAATGGCAAAGAGGCCTGCTTCAGTTCCCATATCTGTGGAGAACACTGGCTCTTTTGTGATACCGTCTTCTTTTTGCAATCTGACCTTACTATATGAGTTCGATGCCCGTTCTTGGGGGTTATCTGGGAAAATTCCTGATGAATTCGAGAAGCTATCATTTATAGAGACTTTAAATTTGGGTCAAAACAATTTCCATAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTCAAGAAACTCTTACTTCCGAATTGCATGGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAACGCTGATAATTGTTATGCATTAGAAACTATACACAACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAGCTCACAAACTGTGAGAAAGTGGCGGATATTCCAGGTCTTGAATGCTTGAAATCCTTGAGAAGATTGTTCCTTAGTGGTTGCAATGCATGCTCCTCCAAAGCACGCAAAGGACTTTCAAAGGTTGCACTGAGAAATCTTCAGAACTTGAGCATGCCAGGAACCAAGTTACCTGAATGGTTTTCTGGAGGAACTGTCAGCTTTTCCAAGCACAAAAATCTTGAGCTAACAAGTGTAGTTGTAGGTGTTAATTTCTCAATTAACCATAACAATATGAATATTGAAACACCTGGAGTGGTTGATGTTCAAGCAAATGTTTTCAAATCGGGCAAACAAATATTTAGTTCAGGGCTAAACATATGGGGAGTGCCAAGGACAGATGAACCACACATACAGTTGCAAAGGTTCCATGATTACCATCCATTGGTAGCCTTCTTAAAAGACGCTGATACGGTTAGTGTGACAAAGAGGAGTCCTCCTTTTGATGAGAGGTTTGAATTGATAAAATGTGGAATTCATCTAATCTATGAAGGGGATGATGATTATGAGGGAGACGAAGAATCGCTGGACCAAGGGTTACAATCTGTCTCAGAAAGGTGTATGTCCGGTGTTGAAAGAAGAGATTGA 3987 0.3948 MMSSSSSLSGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHGQGVRAFMDDEGLDRGDRIDITLLQAIDDSAASIVIISRNYADSHWCLDELVRIFECKRLVIPVFYKVDPSHVRKQSGPFQKGFTDLENRFGNLMVSKWRHSMKLLGGLAGFVFNDSYEGQLENLIHLLVKRVLKELSNTPMVVAEFLVGLNERVDKVIHLLQVQPNSVKVLGLYGMGGVGKTTLAKALFNTLVARFERRCFVSNVRNSSSKEGGLLSLQSNIIKDLSSQQGAQSFVSDVNAGIATIKRIVHENPVLLVLDDVDNVSQLDALIGKREWFYKGSCIIITTRDTTALPEKHVNQMYEVKELYDEEALQLFSYHALKKKDPPPSFLDLSKKIVSLTGRMPLALEVFGCFLCERRRVEEWEDAVVKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFLQMEMKRGDVIDILRGCGFRGEIAMTILVQKCLIKIKHDNTLWMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKKRSIIVAEKYNYVTLDTKSFEPMVTLRLLQINNMSLEGEFLPDELKWLQWQGCPLECIPLDTLPRELAILDLSNAEKIKSLSALESHNKVPENLLVINLSDCYQLAAIPDLSGCLKLEKIIMENCINLKWIHESIGSLTTLRNLNLRRCKIITELPSDVSGLKHLEILVLSSCTNLKVLPENIGILKSLKTLEADGTAIVKLPKSIFRLTKLERLVLDSCSYLGRLPNCIGKLCSLQELSLNQSGLQELPKTIGYLKNLEKLSLNWCASLTQLPDSIGNLVSLTKLLAYNSGIKELPSTIGSLSFLRTLSVGNSKRLSKLPDSIKTLASIIELELDGTPIKYLPDQIGEMKQLRKLDIGNCSNLESLPKFIGHLGSLTSLNINNGNIKELPVSIGLLENLVTLTLNKCRMLKHLPASIGKLKSLCHLKMEETAMFDLPESFGMLSSLRSLRMAKRPASVPISVENTGSFVIPSSFCNLTLLYEFDARSWGLSGKIPDEFEKLSFIETLNLGQNNFHSLPSSLKGLSFLKKLLLPNCMELTSLPSLPSSLIELNADNCYALETIHNMSNLESLEELKLTNCEKVADIPGLECLKSLRRLFLSGCNACSSKARKGLSKVALRNLQNLSMPGTKLPEWFSGGTVSFSKHKNLELTSVVVGVNFSINHNNMNIETPGVVDVQANVFKSGKQIFSSGLNIWGVPRTDEPHIQLQRFHDYHPLVAFLKDADTVSVTKRSPPFDERFELIKCGIHLIYEGDDDYEGDEESLDQGLQSVSERCMSGVERRD 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01722 1328 CDD ABC_ATPase 198 332 - -
Vifa4g01722 1328 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 152 IPR035897 -
Vifa4g01722 1328 Gene3D - 15 177 IPR035897 -
Vifa4g01722 1328 Gene3D Ribonuclease Inhibitor 719 997 IPR032675 -
Vifa4g01722 1328 Pfam NB-ARC domain 194 418 IPR002182 GO:0043531
Vifa4g01722 1328 SMART till_3 16 150 IPR000157 GO:0007165
Vifa4g01722 1328 Gene3D - 349 434 IPR042197 -
Vifa4g01722 1328 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Vifa4g01722 1328 Gene3D Ribonuclease Inhibitor 998 1210 IPR032675 -
Vifa4g01722 1328 Gene3D Ribonuclease Inhibitor 534 718 IPR032675 -
Vifa4g01722 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 444 IPR027417 -
Vifa4g01722 1328 Pfam TIR domain 17 158 IPR000157 GO:0007165
Vifa4g01722 1328 SUPERFAMILY Outer arm dynein light chain 1 557 699 - -
Vifa4g01722 1328 SUPERFAMILY L domain-like 1015 1248 - -
Vifa4g01722 1328 PRINTS Disease resistance protein signature 384 398 - -
Vifa4g01722 1328 PRINTS Disease resistance protein signature 893 909 - -
Vifa4g01722 1328 PRINTS Disease resistance protein signature 212 227 - -
Vifa4g01722 1328 PRINTS Disease resistance protein signature 291 305 - -
Vifa4g01722 1328 SUPERFAMILY RNI-like 654 989 - -
Vifa4g01722 1328 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 773 IPR044974 GO:0006952
Vifa4g01722 1328 SMART LRR_typ_2 731 754 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 825 848 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 1047 1069 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 683 707 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 919 942 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 872 895 IPR003591 -
Vifa4g01722 1328 SMART LRR_typ_2 778 801 IPR003591 -
Vifa4g01722 1328 Gene3D - 178 344 IPR027417 -
Vifa4g01722 1328 ProSiteProfiles TIR domain profile. 15 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01722 Vifa-Chr4 488760795 488766065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01722 17 884 WRKY Transcription Factor Family AT4G12020 28.891 1.73e-75 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01722 - - mtr:11408681 1996.09