Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01719 ATGTCTTCGTCTTCTTCTTCTTCTTCCACGGCTGGAGGAGCATTCAGGCTTCGCTGGGATGTGTTTTTGAGTTTCAGAGGTGAAGACACTCGCGAATGCTTCACCAAAAAACTATACGAATCTCTCCATGGTCAAGGAGTTCGTGCTTTCATGGACGACGAGGGTTTGGACCGTGGGGATCGTATAGATATCACTCTTCTTCAAGCTATTGATGATTCTGCTGCTTCCATTGTTATTATCTCTCGTAATTACGCTGACTCTCATTGGTGTCTCGATGAACTTGTCAGGATTTTTGAATGCAAGAGGCTTGTTATTCCCGTTTTCTACAAAGTTGATCCTTCTCATGTTAGGAAACAGTCCGGCCCTTTTCAAAAAGGTTTTACTGATCTTGAAAACAGATTTGGTAATCTTATGGTTTCCAAGTGGAGACATTCTATGAAGTTACTTGGTGGACTTGCTGGCTTTGTTTTCAATGACAGTTATGAAGGCCAGCTTGAAAATCTGATACACCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTCGCTGAGTTTCTAGTCGGGCTCAATCAACGTGTTGACAAGGTCATACATCTGTTACAACTTCAACCCAACAGCGTCAAGGTCTTAGGGTTGTATGGGATGGGAGGTGTTGGTAAGACAACACTTGCCAAGGCTCTTTTCAATACTCTCGTTGCTCGCTTTGAGCGTAGATGTTTCGTTTCAAATGTGAGAAACTCCTCGTCTAAAGAGGCTGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTCAACAAGGAGCTCAGAGTTTTGTAAGTGATGTCAATGCCGGTATTGCTACTATCAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAGCCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATAAAGGAAGCTGTATAATCATTACAACAAGGGACACGACTGCTTTGCCTGAAAAACATGTCAACCAGATGTATGAAGTCAAAGAATTGTATGATGAAGAAGCTCTACAATTATTCAGTTACCATGCTTTGAAGAAAAAGGACCCTCCACCAAGTTTTCTGGATCTTTCAAAGAAAATTGTATCTCTTACCGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTGTGAGAGAAGGAGGGTGGAGGAGTGGGAGGATGCTGTTGTGAAGCTGAGAACAATTCGACCCGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGACGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTCTTCAAATGGAAATGAAGCGCGGTGATGTGATTGATATATTGAGAGGTTGTGGGTTTAGAGGAGAGATAGCTATGACCATCCTTGTACAGAAATGCTTAATCAAAATAAAACATGACAATACCTTGTGGATGCATGATCAAATTAGAGACATGGGAAGACAGATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGAAGTAGACTGTGGGATCGTGCTGAAATCATGTCCGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATTGTACTAGACTTTAAGAAAAGATCAATCATTGTAGCAGAGAAATATAACTATGTTACACTTGATACAAAATCCTTTGAACCAATGGTTAACCTGAGATTGCTTCAGATCAATAATATGAGTTTGGAGGGCAAGTTTCTTCCAGATGAACTGAAATGGCTACAATGGCAAGGATGTCCTTTGGAGTGCATTCCTTTGGACACATTGCCACGTGAACTGGCTGTCCTTGATCTCTCAAATGCTGAGAAAATTAAGAGCTTGAGGGCATTGGAAAGTCACAACAAGGTACCAGAGAACCTAATGGTCATTAAACTCTCTGACTGCTACCGACTTGCTGCAATCCCTGACTTATCTAGGTGTCTCAGGCTGGAGAAAATTATTTTGGATAGCTGCATTAATCTCAAAAGGATTCATGAATCAATTGGCAGTTTGACTACCTTGCGTATTTTGAGCTTGAGGCGTTGTGAAAACATCACTGAGATTCCCAGTGATGTATCTGGGCTGAAACATCTGGAGAGCCTCGTTCTTTCTAATTGCACCAAGTTGAAAGCATTACCAGAAAGCATAGGCATGCTTAACTCGCTGAAAACACTTGAGGTGGTTGACACTGCTATAGTAAAGTTGCCCGAGTCTATTTTTCGCTTGACCAAACTCGAACGACTCGTTTTAGATCATTGCTCATATTTGAGAAGACTGCCAAACTGCATTGGAAAATTATGTTCACTGCAAGAATTATCTCTTAATCATTCAGGCTTACTAGAATTACACGACACTCTGGGATCCTTGATAAATCTTGAGAAGTTAAGTTTGATTTGGTGTGAATCTCTCACGGTAATGCCTGATTCTATAGGAAATCTCGTATCGTTGACAGAACTTTTAGCTTTCAACAGTGGAATTAAAGAACTTCCTTCCACCATTGGTTCTTTATCCAATCTGAGAATGTTATCAGTTGGAAACAGTAAACATCTCAGTAAATTGCCTGATTCAATTAAAACTCTGGCCTCAATTATTGAACTTAAGTTAGATGGAACACCCATCAAATATCTTCCTGATCAAATTGGAGAAATGAAACAACTAAGGAAGCTTGATATTGGGAATTGCAGCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGGATCTCTTACTTCGCTGAACATAAACAATGGAAATATCAAAGAATTACCAGTGTCAATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACACCTCCCAGCTTCTATAGGAAACTTAAAATCTCTATGTCACTTAAATATGGTGGAAACAACTATGTCAGACTTGCCTGAAAGTTTTGGTATGCTCTCAAGCTTGAGAACACTAAGAATGGGAAAGACGCCTAATTTAGTTCCCATATCTGTGGAGAACACGGGCTCTTTTGTGATACCGTCTTCTTTCTGTAATCTGACCTTGCTATCTGATTTCGATGCCCATGCCTGGGGATTATCTGGTAAAATTCCCGATGAATTCGAGAAGCTATCATTAATGGAGACTTTAAAATTGGGCCACAACAATTTCCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTCAAGAAACTCTTACTTCCAAATTGCACTGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAACGCTGATAATTGCTACGCATTAGAAACTATACACGACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAACTCACAAATTGTGGGAAAGTGGCGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCCATGCATGCTCCTCCAAAGTACGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCGGGAGAAACTGTAAACTTTACCAAGCGCAAAAATCTTGAGCTAAAAAGTGTAGTTGTAGGTGTTATTTTCTCAATTAACCACAACAATATGAAAAATCAAATCCCCGATGTGGTTGATATTCAAGCAAAGGTCCTCAAATCAGGCGAACAAGTTTTTAGTTCAGTGTTATTCATAGGTGGGGTGCCAAGGACAAATGAACCACAAATACACTTGCGAAGGTTCCATGATTACCATGCATTGCGAAGGGAGTTAAAAGAAGCTGATACGGTTTGTGTGGCAAAGCGAAGTCCTCCTTTTGATGAGAGGTTGGAATTGATAAAATCTGGAATTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGACGAAGCATCGTTGGACAAAGGCCTACAATCTGTCTCAGAAAGGATAGCCAGGTTTTTTAACACTTATGATGAAGGTGTTGATGCAACTGAGAGTGAAGATAAGTGTCAACATGGATTGGAGCAGGTAAAAGAAAAGCCTCGAACTAGATTACTTGGTGTTAAAGGCAATTCTATTATTCTCTTCCTGTTTAATCTATTCTTTTTGCTGTTGGGTTGGTTTTGGTTGAGATATATGTCAAGTGTTGAAAGAAGAGATTGA 4179 0.3979 MSSSSSSSSTAGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHGQGVRAFMDDEGLDRGDRIDITLLQAIDDSAASIVIISRNYADSHWCLDELVRIFECKRLVIPVFYKVDPSHVRKQSGPFQKGFTDLENRFGNLMVSKWRHSMKLLGGLAGFVFNDSYEGQLENLIHLLVKRVLKELSNTPMVVAEFLVGLNQRVDKVIHLLQLQPNSVKVLGLYGMGGVGKTTLAKALFNTLVARFERRCFVSNVRNSSSKEAGLLSLQSNIIKDLSSQQGAQSFVSDVNAGIATIKRIVHENRVLLVLDDVDNVSQLDALIGKREWFYKGSCIIITTRDTTALPEKHVNQMYEVKELYDEEALQLFSYHALKKKDPPPSFLDLSKKIVSLTGRMPLALEVFGCFLCERRRVEEWEDAVVKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFLQMEMKRGDVIDILRGCGFRGEIAMTILVQKCLIKIKHDNTLWMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKKRSIIVAEKYNYVTLDTKSFEPMVNLRLLQINNMSLEGKFLPDELKWLQWQGCPLECIPLDTLPRELAVLDLSNAEKIKSLRALESHNKVPENLMVIKLSDCYRLAAIPDLSRCLRLEKIILDSCINLKRIHESIGSLTTLRILSLRRCENITEIPSDVSGLKHLESLVLSNCTKLKALPESIGMLNSLKTLEVVDTAIVKLPESIFRLTKLERLVLDHCSYLRRLPNCIGKLCSLQELSLNHSGLLELHDTLGSLINLEKLSLIWCESLTVMPDSIGNLVSLTELLAFNSGIKELPSTIGSLSNLRMLSVGNSKHLSKLPDSIKTLASIIELKLDGTPIKYLPDQIGEMKQLRKLDIGNCSNLESLPESIGHLGSLTSLNINNGNIKELPVSIGLLENLVTLTLNKCRMLKHLPASIGNLKSLCHLNMVETTMSDLPESFGMLSSLRTLRMGKTPNLVPISVENTGSFVIPSSFCNLTLLSDFDAHAWGLSGKIPDEFEKLSLMETLKLGHNNFHSLPSSLKGLSFLKKLLLPNCTELTSLPSLPSSLIELNADNCYALETIHDMSNLESLEELKLTNCGKVADIPGLECLKSLRRLYLSGCHACSSKVRKRLSKVALRNFQNLSMPGTKLPEWFSGETVNFTKRKNLELKSVVVGVIFSINHNNMKNQIPDVVDIQAKVLKSGEQVFSSVLFIGGVPRTNEPQIHLRRFHDYHALRRELKEADTVCVAKRSPPFDERLELIKSGIHLIFEGDDDYEGDEASLDKGLQSVSERIARFFNTYDEGVDATESEDKCQHGLEQVKEKPRTRLLGVKGNSIILFLFNLFFLLLGWFWLRYMSSVERRD 1392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01719 1392 Gene3D Ribonuclease Inhibitor 743 836 IPR032675 -
Vifa4g01719 1392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 703 IPR044974 GO:0006952
Vifa4g01719 1392 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Vifa4g01719 1392 PRINTS Disease resistance protein signature 214 229 - -
Vifa4g01719 1392 PRINTS Disease resistance protein signature 386 400 - -
Vifa4g01719 1392 PRINTS Disease resistance protein signature 293 307 - -
Vifa4g01719 1392 PRINTS Disease resistance protein signature 895 911 - -
Vifa4g01719 1392 Gene3D Ribonuclease Inhibitor 556 734 IPR032675 -
Vifa4g01719 1392 Gene3D Ribonuclease Inhibitor 1012 1220 IPR032675 -
Vifa4g01719 1392 Gene3D Ribonuclease Inhibitor 837 1011 IPR032675 -
Vifa4g01719 1392 ProSiteProfiles TIR domain profile. 17 160 IPR000157 GO:0007165
Vifa4g01719 1392 Pfam TIR domain 19 160 IPR000157 GO:0007165
Vifa4g01719 1392 SMART LRR_CC_2 1116 1142 IPR006553 -
Vifa4g01719 1392 SMART LRR_CC_2 685 715 IPR006553 -
Vifa4g01719 1392 SMART LRR_CC_2 897 924 IPR006553 -
Vifa4g01719 1392 SMART LRR_CC_2 803 830 IPR006553 -
Vifa4g01719 1392 Pfam NB-ARC domain 196 420 IPR002182 GO:0043531
Vifa4g01719 1392 SMART LRR_typ_2 874 897 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 685 709 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 1049 1071 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 827 850 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 780 803 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 733 756 IPR003591 -
Vifa4g01719 1392 SMART LRR_typ_2 921 944 IPR003591 -
Vifa4g01719 1392 SMART till_3 18 152 IPR000157 GO:0007165
Vifa4g01719 1392 SUPERFAMILY L domain-like 562 739 - -
Vifa4g01719 1392 SUPERFAMILY L domain-like 1004 1198 - -
Vifa4g01719 1392 Gene3D - 351 436 IPR042197 -
Vifa4g01719 1392 Gene3D - 17 179 IPR035897 -
Vifa4g01719 1392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Vifa4g01719 1392 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 154 IPR035897 -
Vifa4g01719 1392 SUPERFAMILY L domain-like 685 999 - -
Vifa4g01719 1392 Gene3D - 180 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01719 Vifa-Chr4 488193992 488199379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01719 783 997 WRKY Transcription Factor Family AT4G12020 30.093 1.24e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01719 - - mtr:11408681 2077.37