Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01710 ATGGCCAACAAGAGTGAAGTGAAGCTTATTGGAAAATGGTCTAGTCCTTATGTGACAAGGGTGAAGATTGCCCTTAACATCAAATCACTTGATTATGAAAACTTTGAAGAGAACGAAACCTTTAATCCCAAAAGTGATCTTCTTCTTCAATCCAACCCTGTTTATGGCAAAGTCCCTGTTCTCGTTCACCAACACAAACCCATTTGTGAGTCTCTCATCATTGTTGAATATATTGATGAAACTTGGTCAACTGCTCCTTCTATTCTCCCCACTGATGCTTACCATAGAGCTCTTGCTCGGTTCTGGGCTGCTTATATAGATCAAAAGTGGTTTCCTTCTATGCAAAGCATAATTACTGTTGAAGGAGAAGAGGAAAGGAAGGCATATTTTGAGGTGATGGAAGAAGTGGTTGAGAGGCTGGAGGATGCTTTTGAAAAATGCAGTAAAGGAAAGCCCTTTTTTGGTGGTGACAGGATTGGGTATCTTGATGTTGCATTTGGATGCTTTTTGGGATGGCTTAGTGTGATAGAGAATGAGTATGATAGGAAAGTGTTGGTTGAAGAAAAATCTCCTAATTTGGTGAAATGGGCTGAGAGATTTGTTGATCACCCTGCTGTCAAAGGGATTATACCTGAGACTGAGAGACTTGTTAAGCTTTCCAAAGCTCTTCAGATCAAATGGAGAGCTGCTATTGGTAACGTGCAGATACTCAGGAGTAGATTTCATGGACGTAAGAGGAAGTTAGTCACTAGAGTTTATTTGTAA 765 0.4026 MANKSEVKLIGKWSSPYVTRVKIALNIKSLDYENFEENETFNPKSDLLLQSNPVYGKVPVLVHQHKPICESLIIVEYIDETWSTAPSILPTDAYHRALARFWAAYIDQKWFPSMQSIITVEGEEERKAYFEVMEEVVERLEDAFEKCSKGKPFFGGDRIGYLDVAFGCFLGWLSVIENEYDRKVLVEEKSPNLVKWAERFVDHPAVKGIIPETERLVKLSKALQIKWRAAIGNVQILRSRFHGRKRKLVTRVYL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01710 254 Gene3D - 89 231 - -
Vifa4g01710 254 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 229 IPR010987 -
Vifa4g01710 254 Pfam Glutathione S-transferase, N-terminal domain 6 80 IPR004045 -
Vifa4g01710 254 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Vifa4g01710 254 CDD GST_C_Tau 93 223 IPR045074 GO:0004364|GO:0006749
Vifa4g01710 254 Gene3D Glutaredoxin 1 88 - -
Vifa4g01710 254 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Vifa4g01710 254 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 216 IPR045073 -
Vifa4g01710 254 SFLD Glutathione Transferase (cytosolic) 3 228 IPR040079 -
Vifa4g01710 254 SFLD Main.3: Omega- and Tau-like 3 228 IPR045073 -
Vifa4g01710 254 FunFam Glutathione S-transferase U9 89 230 - -
Vifa4g01710 254 Pfam Glutathione S-transferase, C-terminal domain 101 204 IPR004046 -
Vifa4g01710 254 SUPERFAMILY GST C-terminal domain-like 88 220 IPR036282 -
Vifa4g01710 254 CDD GST_N_Tau 7 82 - -
Vifa4g01710 254 FunFam Glutathione S-transferase GSTU6 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01710 Vifa-Chr4 484767085 484768992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01710 6 223 Glutathione S-transferase Gene Family AT1G10360 57.534 6.17e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01710 K00799 - cam:101508281 397.127