Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01679 ATGGAAGATGTATGGGAAACATGGATTTCTTCTTTGGAAATGGATATTGGTCACTCATTGGATGAAGACAAGTTTGACATAGAGAATGTGCAACAACCAAGTTTCTCTTTTGAGGGTTCTAATAATGTCAAATCTTCAATTCATAGTATTAGCTTAAATTGTCTCATTTCTCAAGAACATTATGATGCTAATTCAAAACAAACACCATCTCAACACCTTCTGCCTTTTGAAAACTCATGTGTGAAACCTTCTCCTAATAGTGCCATTGCTACATGTTCTTCGATCATGGACCCAAAAACAACAACATTGAATCACAATGAGAGCACACTTTCTGCCACCATTCCTGGATTGAAGAAGACAGATAAGGTATACATACTAGAAGAAGCTATCAAATATGTGAAACAACTTGAAGAGAAAATAAAAGAGCTGGACAATCAAAACAAAATGAAAAATAAATATTCAGAAATATTGATCAAGAAATCTCAAGCTTGCACAAAAAAGGATGATATTGATGAGGATGAATATTATTTCAAAAAAGAACTACCTAAGGTTAAAGCAAGAGTGATAAATAATGAAATTATGGTTGGAATCCATTGTGAGAAACAAGAGAATATTGTGGTTAAAATAATGGGGTTGCTTCAAAATCTTCATCTATCACTTGCTAGTAGTAGCATATTACCATTTGGAAATTCCACTCTTAAGGTTACAATCATTGCTCAGATGAATGATAAATACTGCATGAACACCACATAG 753 0.332 MEDVWETWISSLEMDIGHSLDEDKFDIENVQQPSFSFEGSNNVKSSIHSISLNCLISQEHYDANSKQTPSQHLLPFENSCVKPSPNSAIATCSSIMDPKTTTLNHNESTLSATIPGLKKTDKVYILEEAIKYVKQLEEKIKELDNQNKMKNKYSEILIKKSQACTKKDDIDEDEYYFKKELPKVKARVINNEIMVGIHCEKQENIVVKIMGLLQNLHLSLASSSILPFGNSTLKVTIIAQMNDKYCMNTT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01679 250 PANTHER BHLH TRANSCRIPTION FACTOR 109 249 - -
Vifa4g01679 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 153 IPR036638 GO:0046983
Vifa4g01679 250 Coils Coil 126 156 - -
Vifa4g01679 250 Gene3D - 99 159 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01679 Vifa-Chr4 481411604 481416366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01679 103 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 36.875 1.06e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01679 - - psat:127076671 353.599