Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01662 ATGTGGAGATGCATATTCAGCAACCTCTCATCATCTCAACACGTGGAACAAGTCATCGGTGATAGTGGGATTGAAAATCGATTGGTTCTAAGTTATAAGAGAAGTTTCAATGGTTTTGCTGCCATATTCAATGACCAACAAAAGGAAAAACTTCTCGGTATGAAAGAGGAGAATGCAAGAGACGAGACTGGTCACGGAACCCATACAACATCAATCGCAGGTGGAAGAGAGGTGCAAGATGTGAGCTTTTACGATCTTACAAAAGGCACTGCAAGGGGTGGAGTCCCATCTTCAAGGATTGTTGTGTACAAATTATGTGGCGCAGATGGTACATGCAGTGGTAGTAATATCTTAGCTGCATTTGATAATGCCATTGCTGATGGAGTTGGCATTATCACAATATCAATTGGGGGCTCAAATGCCCTTGAATTTCTTAAATATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATTCTCACATCGCATTCGACAGAAAACTCTGGTCCTAGACCACTTTCTATTGCAAGTGTAACACCTTGGTTATTTAGTGTTGCTACATCTACTATAGATCTTCAATTCATTGATAAGCTCATTCTTGGAAATGAAAATACTATCATTGGCAAGTCAGTCAATACGTTCCCCTCAAATGGCACAAAAATTCCAATAGCTCACGGTACTTGCTTTTATAACTTTGGCCAAAAAATGGTTAAAGATTATCTTATTGCTCAATCTTACGTAAAATACACTAAATTCCCCATGGCTGAAATTTTGAAGAGTGAGATCTTCCATGATACAACTGCTCCTAGAATTGCATCTTTCTCTTCTCGTGGCCCAAATTCAATTGTTCTAGATATTATGAAATCAGATATAAATGCCCCTGGAGTGGATATTTTAGCTGCTTTTTCACCTTTAGCCCCACCCTCTGGACATGTCAGTGACATGAGAAAAGCCAGTTACAACATATTATCAGGAACTTCTATGGCATGCCCTCATATTACTGGAATTGTTGCATATGTGAAATCATTTCATCCAAATTGGTCACCAGTAACTATTAAATCTGCCATCATGGCCACGACAAAACCAGTGAATGATACTTATAATGATTTGGCTGGTGAATTTTCTTATGGATCAGGGAATGCCAATCCACAACTAACTGTTAACCCATGA 1176 0.392 MWRCIFSNLSSSQHVEQVIGDSGIENRLVLSYKRSFNGFAAIFNDQQKEKLLGMKEENARDETGHGTHTTSIAGGREVQDVSFYDLTKGTARGGVPSSRIVVYKLCGADGTCSGSNILAAFDNAIADGVGIITISIGGSNALEFLKYPIAIGSFHAMEKGILTSHSTENSGPRPLSIASVTPWLFSVATSTIDLQFIDKLILGNENTIIGKSVNTFPSNGTKIPIAHGTCFYNFGQKMVKDYLIAQSYVKYTKFPMAEILKSEIFHDTTAPRIASFSSRGPNSIVLDIMKSDINAPGVDILAAFSPLAPPSGHVSDMRKASYNILSGTSMACPHITGIVAYVKSFHPNWSPVTIKSAIMATTKPVNDTYNDLAGEFSYGSGNANPQLTVNP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01662 391 PRINTS Subtilisin serine protease family (S8) signature 61 74 IPR015500 -
Vifa4g01662 391 PRINTS Subtilisin serine protease family (S8) signature 326 342 IPR015500 -
Vifa4g01662 391 Pfam Subtilase family 39 380 IPR000209 GO:0006508|GO:0008236
Vifa4g01662 391 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 212 IPR045051 -
Vifa4g01662 391 Gene3D Peptidase S8/S53 domain 53 192 IPR036852 GO:0004252|GO:0006508
Vifa4g01662 391 Gene3D Peptidase S8/S53 domain 267 391 IPR036852 GO:0004252|GO:0006508
Vifa4g01662 391 ProSiteProfiles Serine proteases, subtilase domain profile. 1 391 - -
Vifa4g01662 391 SUPERFAMILY Subtilisin-like 33 386 IPR036852 GO:0004252|GO:0006508
Vifa4g01662 391 Gene3D - 242 266 - -
Vifa4g01662 391 Gene3D - 193 228 - -
Vifa4g01662 391 ProSitePatterns Serine proteases, subtilase family, serine active site. 327 337 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01662 Vifa-Chr4 477496800 477498922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01662 15 55 Subtilisin-like Serine Gene Family AT5G58830 48.780 6.95e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01662 - - psat:127076787 476.478