Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01547 ATGCATGATTTAATAAGAAACATGGGAAGAGAAATTGCTCGTGAAAGTTCAACAAAGCCTGGGAAGCGTAGTCGATTGTGGTTTCATGAGGATGCACTTCATATTTTGACCACAAATTCTGGAACAAAAGCTGTAGAGGGATTGGTTTTGAAGTCGGAAAATACTGGGAGAGTTCACTTCAATACTTATTCTTTCAAGAAGATGGACGGGCTCAGACTTCTACAACTCGACGGTGTTGACCTCAATGGAGATTATGGGAACCTTTCTAAAAAACTGAGATGGCTTCATTGGCGAGGATTTACCTTGAACTATATACCTGATGAATTTTATCAAGGAAATCTAGTTGTTATCAACTTAAAACACAGCAATATTAAAAAAGTTTGGAATAAAACTCAGCTGATGGAGAAGCTGAAAATTCTCAATCTGAGTCATTCCAAGTACTTGACAAGCACTCCCGACTTTTCAAAAATACCAAATCTTGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTTCGAAATACATCCATCCATTGGAGTGCTCAATAATCTTCTTCGGATAAATTTGAAGGACTGTACAGGTCTTAGCCATCTTCCAAAGAAGATCTATCAACTGAAATCTTTGGAAATTCTCATCCTTTCTGGTTGTTCGAAGCTGGACAAGTTGGAAGAAGACATAGTGCAAATGGAATCTTTGGCCATGCTGATTGCAGACAATACAGCTATTAAAAAGGTGCCCTTTTCAATAGTAATATCAAAAAGAATCCGTTATATATCCCTATGTGGATATGAAGGATTCTCACGCGATACTTTTCCCTCTATCATTTGGTCTTGGATGTCACCGACCATGAGCTCTCTTCCATTTAGCAGCCTTTTACATTTGAGAATAATTGGGGTACAATTCCGCTCAAAGATTCAACTTACTCAAGAGTTACGAAGAATTCTTGATGATCAATATGATGTTAGATTTACCGAAGTGGAAACATCACATGCACCACAAATCTCAAATCATTCCTTGAGATCACTTTTGATTGGAATGGGAAGTTTCTACATGGTTATCAATACTCTTAGCAAGAGCATATCACAGGTTCCTTCCTTATCCTCTTGGCTTTTCTAA 1116 0.3763 MHDLIRNMGREIARESSTKPGKRSRLWFHEDALHILTTNSGTKAVEGLVLKSENTGRVHFNTYSFKKMDGLRLLQLDGVDLNGDYGNLSKKLRWLHWRGFTLNYIPDEFYQGNLVVINLKHSNIKKVWNKTQLMEKLKILNLSHSKYLTSTPDFSKIPNLEKLIMKDCPSLFEIHPSIGVLNNLLRINLKDCTGLSHLPKKIYQLKSLEILILSGCSKLDKLEEDIVQMESLAMLIADNTAIKKVPFSIVISKRIRYISLCGYEGFSRDTFPSIIWSWMSPTMSSLPFSSLLHLRIIGVQFRSKIQLTQELRRILDDQYDVRFTEVETSHAPQISNHSLRSLLIGMGSFYMVINTLSKSISQVPSLSSWLF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01547 371 SUPERFAMILY L domain-like 58 307 - -
Vifa4g01547 371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 246 IPR044974 GO:0006952
Vifa4g01547 371 Coils Coil 219 239 - -
Vifa4g01547 371 Gene3D Ribonuclease Inhibitor 34 369 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01547 Vifa-Chr4 452665295 452666788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01547 1 249 WRKY Transcription Factor Family AT4G12020 37.970 1.98e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01547 - - psat:127076556 611.683