Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01532 ATGCTTCGGTTTATCTCCAATGGGTCAAATCTTTCCGAAAATGAGGTTAAATTGCAAAAACTTAGAGATAAATGGAAGGATGCCACTGAAGTTTTAAGCAAATGGGGTTGTGTTGAAGACGATTTGAAGATAATATTTACCCGTTGCCCCGCATTGCGCAATGCAGATCCTGCTCAGGTTCAATCTAAGCTTTGCTTGCTTAGTGACTTGGGTTTAGGGTCATCTGAGCTAGTGCAGATTATCAATTGCAGGCCTCGATTTTTCAGGACGCGGATTAACCATAAGTTCGAAGAGAGGCTTGACTCTCTTATTTCATTGTTTGAGTCAAAGGAAATGCTTCACAAGGCCATTCTGAGAAACCCTTCACTGTTGTGTGAAAATAGCTATGACATTGACGGTATTGTTGCACAATATGAAAAGTTAGGTGTACCAAAAAGGGACTTAGTTAAAATGCTGATTTTGCGGCCAACAATCATTTCGAGGACTTCCTTTGACGATGAGAAACTCGAATATATAAGTAGGTCTAGGGTTTCGAAGGATGCCAAATTGTACAAGTATGTGGTGACATTAATAGGCATTTCTCGCGTGGACACAATTCGTGAAAAGGTCTTGAATATTGCAAAGTTTGGTTTTTCGGATGATGAGGTACTTGGTCTTTTTGGGAGGTCTCCTAATATTTTGACAATTTCAACTGATAAGGTTCAGAGGAACATGACTTTCATTTTAGGTACAATGAAGCTTGAAGCTAAGACGATCTTAAAGTATCCGAATCTCTTGTTCGTAAATATGGAGACTGTTTTGAAGCCAAGAGGGCTTCTAGCAATGAAGATACGAGATATGGATTCCAAGTTGAAATTACCTTCAATACTCATGGCATTGAGGATGTCAGAGGAGAGGTTTTTAAAGTTGTTTGTTGAATGTCATGACAAGGAAATTGCTGATGAATTAATGGAGTTTTATACAAGGACAAAAGAGGCTAAGAGATTAGCAGCTTCATCGAAGACTTGTACTACTAGAGGTTTCCCTTTTTGA 1032 0.3895 MLRFISNGSNLSENEVKLQKLRDKWKDATEVLSKWGCVEDDLKIIFTRCPALRNADPAQVQSKLCLLSDLGLGSSELVQIINCRPRFFRTRINHKFEERLDSLISLFESKEMLHKAILRNPSLLCENSYDIDGIVAQYEKLGVPKRDLVKMLILRPTIISRTSFDDEKLEYISRSRVSKDAKLYKYVVTLIGISRVDTIREKVLNIAKFGFSDDEVLGLFGRSPNILTISTDKVQRNMTFILGTMKLEAKTILKYPNLLFVNMETVLKPRGLLAMKIRDMDSKLKLPSILMALRMSEERFLKLFVECHDKEIADELMEFYTRTKEAKRLAASSKTCTTRGFPF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01532 343 FunFam Mitochondrial transcription termination factor family protein 96 314 - -
Vifa4g01532 343 Pfam mTERF 166 301 IPR003690 GO:0003690|GO:0006355
Vifa4g01532 343 Pfam mTERF 30 158 IPR003690 GO:0003690|GO:0006355
Vifa4g01532 343 Gene3D Transcription termination factor 3, mitochondrial 166 314 IPR038538 -
Vifa4g01532 343 PANTHER CGI-12 PROTEIN-RELATED 28 309 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa4g01532 mTERF 6.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01532 K15032 - gmx:100799629 428.713