Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01515 ATGAAGCTATTTTCAATTTTCCTTATCTTCACCATCTTCATCATTGCATCAGCATTAGTTGCTGCGAAGAATGCTGCTGATGTAACGGAGTTGCAGATTGGCGTTAAGTATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGCGATAAAGTGAAAGTACACTACCGGGGAAAACTCACTGATGGAACTGTATTCGATTCTAGCTTTGAAAGAAATAGTCCCATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGTCTTGGTGAGAAGCGAAAACTGAAAATCCCAGCAAAACTTGGCTATGGAGAGCAGGGTTCCCCACCAACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGCTTAAGCGAAGAAAAATCAACCTCGTCCGAACTGTAG 456 0.4276 MKLFSIFLIFTIFIIASALVAAKNAADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKSTSSEL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01515 151 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Vifa4g01515 151 PANTHER PEPTIDYLPROLYL ISOMERASE 9 139 IPR044609 GO:0000413|GO:0003755|GO:0061077
Vifa4g01515 151 Gene3D - 15 150 IPR046357 GO:0003755
Vifa4g01515 151 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Vifa4g01515 151 FunFam Peptidylprolyl isomerase 17 137 - -
Vifa4g01515 151 SUPERFAMILY FKBP-like 35 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01515 Vifa-Chr4 447682521 447688641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01515 15 151 Calmodulin-binding Proteins AT3G25230 27.083 2.72e-06 43.9