Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01509 ATGGATCTATATTCTTATTTTCAAATTACTGCATTCATCTTAACCTTATTGATTGCACAACTTGTCTTTAGAACTATTAGATCACCTAATAGATCTAAAGAAAGTAGATTCAACATCAACCATAACAAAATACCCGAACCATGTTTTGCTTTACCTTTCATAGGTCACCTTCATCTTCTAAACACTAAAGAACCATATTTTAGAACCTTTTCTACCATGGCTGAGAAATATGGTTCAATATTCTCCCTTAGGATTGGTTGTCACAAAACCCTAGTGGTTAGTAGTAGAGAAATTGCCAAAGAATGTCTCACAAAAAATGACAATTTTTTTGCTTCAAGACCTAATGTAGCTGCAGGGAGATACATGGGTTACAACAATGCTGTTTTCGCTTTTGCACCTTATGGAGATTATTGGAGAAATATGAGAAAAGTTGCTACTATTGAGCTTTTATCTAGTCATAGACTTGAAAAGTTAAAACATGTTAGAGATTTGGAGATATATTCTCTAGTAAAAGATTTGTACACATTTGTAAAAAACTCAAATGGTTCATATGAAGTGCCTATTAGCAAGTTTTTAGATCTTATGGCATTTAATATAATTGTGAGGATGATAGTTGGGAAAAGATTTAGTGGTGAGACAATAAATCAAGAAGATAGTGAGGCATGGAGATTAAGGAACGCAATTAAAGATGCAACATATCTAAGTGGTGTTTTTGTTGTGGCTGATGCAATTCCTTTTCTTAGCTGGTTTGATTTTCAAGGGCAAGTGAGTTTCATGAAGAGGACAGCTAAGGAAATGGATTTTATTCTTGATAAGTGGTTGCATGAACATTATAGAAAGAGAGATGACGGACAAAATGGTAAATATGAAGATGATTTTATGGATGTGTTGATATCAATGTTTGAAGAGGATGATGAAATTTGTGGCCACAAACGGGGTGTAGTTATCAAAGCAACATCTATGATTCTTATCCTTACAGGCTCAGGAAGCACATCAATAACATTAATATGGGCTCTTTCATTACTTATAAACCATCCAAAGATCTTGAAACAAGCTCAACAAGAATTGGACACAAACATAGGAAAACACAAGTGGGTCCAAGAGTCTAACATCAAAGACCTCAAATATCTTCAAGCAATTATCAAAGAGACTCTTCGACTATACCCACCAGCACCCTTAACAGGGATAAGAGAAGCCACAGATAATTGCCATGTGGCGGGATACCATGTCACCAAAGGAACTCGTTTGCTTATTAACCTATGGAAATTGCAAAGGGATCCACTAATATGGTCCAACCCTAATGAATTTCAACCCGAGAGATTTTTCAATACTCATAATCACATTGATTTTCATAATCAAGATTTTGGGTATGTGCCATTTAGTTATGGAAGAAGATCTTGTGCTGGTTCAACATTTGGGTTACAAGTGTTACATTTGACTTTGGCTAGGTTGATTCAAGGGTTTGATATATATACTAAAGAAGGTAATGAAGTTGATATGAGTGAAGCGTTAGGGTTGGCATTACCTAAGAAAAATCCACTTGAAGTTATGCTTCAACCACGTCTTCCATTGGAGCTTTATGAAAGCCTTTGA 1593 0.3522 MDLYSYFQITAFILTLLIAQLVFRTIRSPNRSKESRFNINHNKIPEPCFALPFIGHLHLLNTKEPYFRTFSTMAEKYGSIFSLRIGCHKTLVVSSREIAKECLTKNDNFFASRPNVAAGRYMGYNNAVFAFAPYGDYWRNMRKVATIELLSSHRLEKLKHVRDLEIYSLVKDLYTFVKNSNGSYEVPISKFLDLMAFNIIVRMIVGKRFSGETINQEDSEAWRLRNAIKDATYLSGVFVVADAIPFLSWFDFQGQVSFMKRTAKEMDFILDKWLHEHYRKRDDGQNGKYEDDFMDVLISMFEEDDEICGHKRGVVIKATSMILILTGSGSTSITLIWALSLLINHPKILKQAQQELDTNIGKHKWVQESNIKDLKYLQAIIKETLRLYPPAPLTGIREATDNCHVAGYHVTKGTRLLINLWKLQRDPLIWSNPNEFQPERFFNTHNHIDFHNQDFGYVPFSYGRRSCAGSTFGLQVLHLTLARLIQGFDIYTKEGNEVDMSEALGLALPKKNPLEVMLQPRLPLELYESL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01509 530 FunFam Cytochrome P450 82C4 34 519 - -
Vifa4g01509 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 PANTHER CYTOCHROME P450 82C3-RELATED 16 527 - -
Vifa4g01509 530 CDD CYP82 78 521 - -
Vifa4g01509 530 Coils Coil 524 530 - -
Vifa4g01509 530 SUPERFAMILY Cytochrome P450 45 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vifa4g01509 530 Gene3D Cytochrome P450 36 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01509 530 Pfam Cytochrome P450 47 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01509 Vifa-Chr4 445555824 445558095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01509 45 527 Cytochrome P450 AT4G31970 47.959 1.08e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01509 K17961 - gmx:100787489 756.518