Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01495 ATGGCTTTAAAGCTTCCAGATGTGTCAAACCTTAAATCGCTCACAGTTCTGTGCAATGAGGACGGTGAAGCAAATTTTTTTGACAATATAGCCGATCCAGTGATCCGTAAGAGAGTGAAGGCATTGTCGCTATTTAGAAATGTAATCAGTACAAACAAATTATCAGAGTTTATCACTGAAAAAGTGTTCATGCGTCTCTTCTTCAACATGTTGTTTGATGAGAAAGAAGGACAGGTTGACCATATGAAAACTGCATGCATCGAGACCATTGCTTCTGTAGCTGAACCTAAGAAAGCTTTGGTTGGTGTTTCTGACAAGGGGATAAGTGACATTGTTTCTTCAGTTAATTTAGGAAACTTTGGTGCATCTGATGTGAACACAGATATACAGACGTGCCTCTATAAAGTTGTGCTTCCTAAAATACAAAAGCTGATGGATTCTGATTCAGAAAAGGTCAATGTAAATATCAGTCTTGCTGCATTGAAACTACTTAAGTTACTTCCAGGTGATGTGATGGACACATATCTTCCAACTATCATTCATCGAATTTCAAACTTCTTAAAGAGTCGTCTAGAAAGCATTCGTGATGAAGCTAGGTCTGCATTGGCTACTTGTTTAAAAGAGCTTGGATTGGAATACTTGCAATTCATTATTAAGGTTTTGCGATCTACCCTAAAGCGAGGATATGAACTTCATGTCCTAGGATACACACTGAATTTTATTTTGTCCAAGTGTCTCGCAAGTGCAGTTTGTGGAAAGATAGATTACTGTTTGGGGGATCTCCTTTCTATCATAGAGAATGACATTTTTGGAGCTGTTGCAGAGCAGAAGGAGGTGGAAAAGATAGCTTCAAAAATGAAAGAAACAAAGAAGAAAAAGTCATTTGAGAGCTTGAAATTGGTGGCCCAAAACGTAACATTCAAAAACAATGCTCTAAAGCTGCTTGCACCAGTGACTACTCATTTGAAAAAACATGTCACGCAAAATGTGAAAGGAAGATTGGAAAATATGTTGCATAGTATAGCTGCTGAAATCATGTCAAAAGTACAAAATGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAGTCGAAGAAACAGACATAGCCAAATTACCATACATGCAAGCAGTTATAAAAGAGACGTTTCGTGTACATCCACCAGTTCCGTTATTACTACCTCGCAAAGCAGAAACAGATGTTGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGCAGAGATCCAAGTAAATGGGAGAATCCTAATGCTTTTGTGCCGGAGAGATTTTTCAATAGTGAGATTGATTTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCTTTGGTTAATTGCTTTGATTGGAGACTTGAAGATGGATTGAATGTCGATGATTTGAATAAGGAAGATGAGTATGGGATTACCTTGGAAAAATCTCAACCTGTCAGAATTGTTCCAATCAAATTGACTAAGCAATAA 1569 0.3754 MALKLPDVSNLKSLTVLCNEDGEANFFDNIADPVIRKRVKALSLFRNVISTNKLSEFITEKVFMRLFFNMLFDEKEGQVDHMKTACIETIASVAEPKKALVGVSDKGISDIVSSVNLGNFGASDVNTDIQTCLYKVVLPKIQKLMDSDSEKVNVNISLAALKLLKLLPGDVMDTYLPTIIHRISNFLKSRLESIRDEARSALATCLKELGLEYLQFIIKVLRSTLKRGYELHVLGYTLNFILSKCLASAVCGKIDYCLGDLLSIIENDIFGAVAEQKEVEKIASKMKETKKKKSFESLKLVAQNVTFKNNALKLLAPVTTHLKKHVTQNVKGRLENMLHSIAAEIMSKVQNELEQVVGKGIPVEETDIAKLPYMQAVIKETFRVHPPVPLLLPRKAETDVEIGDYIIPKDAQVLVNAWVIGRDPSKWENPNAFVPERFFNSEIDFKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFDWRLEDGLNVDDLNKEDEYGITLEKSQPVRIVPIKLTKQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01495 522 SUPERFAMILY Cytochrome P450 344 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vifa4g01495 522 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PANTHER UNCHARACTERIZED 1 95 - -
Vifa4g01495 522 Pfam Cytochrome P450 344 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 SUPERFAMILY ARM repeat 14 326 IPR016024 -
Vifa4g01495 522 Coils Coil 272 292 - -
Vifa4g01495 522 Gene3D - 20 230 IPR011989 -
Vifa4g01495 522 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS P450 superfamily signature 341 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 Gene3D Cytochrome P450 334 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01495 522 Pfam Domain of unknown function (DUF6700) 147 347 IPR046523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01495 Vifa-Chr4 442406387 442408477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01495 344 518 Cytochrome P450 AT2G45570 55.429 2.21e-69 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01495 K14772 - qsu:112005990 369.392