LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa4g01494	ATGGTACTTTTCATGTTGAGGTACTTTGCTGGTCCAGATGTCCCTCAGGATATGGTCGAACGTAGGGCTGATGTTGTTGCTCGTCTCAAGTCTCTTGAATATGCCGCCGCTCCTCTGGTTGCTTTCCTTCAGAATCCTGCTGCTTTTGAATGTGGAAACTACTCTGGTGCTGCTGACTATCTTTATCAGTACAGAGCATTATGCACAAATAGTGAAAGGAGTTTGAATGCATTGTGGGGAAAGCTGGCAGCTGAAGTATTGATGCAAAATTGGGATATTGCTCTTGAAGAGCTCAACCGCCTGAAGGAAATAATTGACTCAAAGAATTTTTCATCACCTATTAATCAGGTGCAAAGCAGAATATGGTTGATGCATTGGAGTCTGTTCATCTTTTTCAACCATGACAATGGAAGAACACAAATCATTGATTTGTTTAACCAGGACAAGTATCTTAACACAATCCAAACTAGTGCTCCACACCTTTTGCGATACTTGGCCACATCATTTATTGTCAACAAAACTTCTGAAGGAAACCTGCCTGATAATGATGCAACAGTCTCTGTTAAACCAGATAATCGTGACTCTGCTCCGCAAGAATCTCCTACTCTAGTGGCTAGTGCATCAGAGAAAACAATCGATTTTGCAGCTTCAAATGAAACCGATAACATTGCTGGTAATTTGAATAACACTGCGACCTCTGGTACCACCGAAAGTGACAAGTCCAAAGGTATCACCGAAACTAGTGAAGCAAAAGAAACTAAGAACATCTACGCCACTGTGGATGAGAGGTTCAAGGGCAATACTCAAATAGGCGAAACTGATGAAAAATCAGACTCTTCCTCAATCACCTTACGCTACGGATCCAGCATGGAAGCATACTGGAATTCGGAAGCTCCTGCTGGTTTTATCTCATCATCACCGCCATTGAAGATACGTCAGACGGACTCCGACCGAGCAAGATGGAGGTCTAAGCCGGACGAAGAGAAATCGCGGCGGCGTTAG	1002	0.4341	MVLFMLRYFAGPDVPQDMVERRADVVARLKSLEYAAAPLVAFLQNPAAFECGNYSGAADYLYQYRALCTNSERSLNALWGKLAAEVLMQNWDIALEELNRLKEIIDSKNFSSPINQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNTIQTSAPHLLRYLATSFIVNKTSEGNLPDNDATVSVKPDNRDSAPQESPTLVASASEKTIDFAASNETDNIAGNLNNTATSGTTESDKSKGITETSEAKETKNIYATVDERFKGNTQIGETDEKSDSSSITLRYGSSMEAYWNSEAPAGFISSSPPLKIRQTDSDRARWRSKPDEEKSRRR	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa4g01494	333	MobiDBLite	consensus disorder prediction	189	241	-	-
	Vifa4g01494	333	MobiDBLite	consensus disorder prediction	313	333	-	-
	Vifa4g01494	333	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E	49	179	IPR016650	GO:0003743\|GO:0005737\|GO:0005852
	Vifa4g01494	333	MobiDBLite	consensus disorder prediction	299	333	-	-
	Vifa4g01494	333	MobiDBLite	consensus disorder prediction	180	251	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa4g01494	Vifa-Chr4	442287491	442290152	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa4g01494	13	181	Eukaryotic Initiation Factors Gene Family	AT3G57290	68.780	1.72e-95	288

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa4g01494	K03250		-	csv:101205199	292.737