Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01476 ATGGCTATAGAGGAGAAAAGTGCATTGTTACAAAACTCAGAAGAAGTCCTGATGAAAAAGAAAATTATGGCTATTGAGAAGATCAATATATATATGCAAAAATTGGAAACAATGAAAAAGAAATTTGACCCATTACCTCATTTTACTTTGCATAGTGTGTTATCTCAACTTTCTCCACAGTTTTATACTGAAGAAGAGTTAACACAAATAGAGAAAGTCAATCAAATTTTGTATCAAGAAGCAAATATTCCTCTTGTTTCACAAAATAAAGTGGAAAAAACAGAAATCAACAACTTAAAAAGGTGTCGGCCAAGTAATGAAGCCAGTAGCATGTCTGATGGAGGAAGAAGAGTAAAACCAAAGCTCGCAATTAAGAGGAAACCAAGAAATCATAAGAGAGAAACTCTACCATCACCACCACCAGAATTGCCTAATCATGTTAATGACATAATCAAAGTGTTGAATGGCATTGATATTAAATATATAATGTGTAAGACATTATGTAACACCGATCTTAGCTATAACAACAAACGTCTTTCAATGCCAATTTCACAAATTAGATCTGATTTCCTGACCGAAATAGAAAAGTCAATCTTAGAAACAAGGGATCAAGAAGGAAAACCAGCTACTTTAAAGGTTACTGTATTAGATCCTTGTTTGAATGAATTCTCATTACATTTGAAGAAGTGGAATATGACCACTACTAGCATTTATAATCTTGCTCAAGACTGGACAAAGGTTTTGTCAAAGAATAATTTTAGGAAGAATCAAAAAATTGATATTTGGTCATTCAGGGTTAATGACAAGTTATACTTTTTACTTGATACTAATGAGTCGGAAGAAATTGAAGAAAGGGAAAAATCAAACAAATCAATTGTGATTTCGACAACGGAAGAAGAAAAGAAGTCAAATGTTGAAGATTGTTGA 927 0.3215 MAIEEKSALLQNSEEVLMKKKIMAIEKINIYMQKLETMKKKFDPLPHFTLHSVLSQLSPQFYTEEELTQIEKVNQILYQEANIPLVSQNKVEKTEINNLKRCRPSNEASSMSDGGRRVKPKLAIKRKPRNHKRETLPSPPPELPNHVNDIIKVLNGIDIKYIMCKTLCNTDLSYNNKRLSMPISQIRSDFLTEIEKSILETRDQEGKPATLKVTVLDPCLNEFSLHLKKWNMTTTSIYNLAQDWTKVLSKNNFRKNQKIDIWSFRVNDKLYFLLDTNESEEIEEREKSNKSIVISTTEEEKKSNVEDC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01476 308 Gene3D - 147 279 IPR015300 -
Vifa4g01476 308 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 63 276 IPR005508 GO:0003677
Vifa4g01476 308 MobiDBLite consensus disorder prediction 284 308 - -
Vifa4g01476 308 SUPERFAMILY DNA-binding pseudobarrel domain 161 280 IPR015300 -
Vifa4g01476 308 MobiDBLite consensus disorder prediction 102 143 - -
Vifa4g01476 308 Pfam B3 domain-containing protein At2g31720-like 143 249 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01476 Vifa-Chr4 435776008 435776934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01476 150 274 B3 DNA Binding Superfamily AT1G05930 28.346 1.99e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01476 - - psat:127101787 372.089