Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01432 ATGAAAGAGTTAACTTTAAACGAATCACCTTTCCTTAACCTCTCTATGGATGAGATACTGGAATTGGAAAGAGCATACAATGGTGCTAGAGAAAAATCACTTGATCAGAGTTTCTGCATGGAGATTGCTACAAGTTTGAGCTCCTTATCAAATAAAAAATCCTTATCATGGGAACAGGTGCAGCAGTGGTTCCATAATAAACATAGAGAGGCGACTGGTCAAGTTGCTTCATCAGTTGAGGGACTGAGTCTTTACGTTGACCTTTTGGATGAATCTTCTTCAAGAAAGGAACATAAGATCTCTCCGAATCCAAAAGGTATTAAAGCAGAAGATCTGTCAGAATTGGGATATGAATCAATATCTATAAAAGACAAAGCATGGCATGACGTTGCAATGTTTCTAAACTATAGGGTTCTAAGCACAGGCGAACTTGAAGCTCGTGTACGATATCTTGGATTTGGTAAGGAGGAGGATGAATGGGTCAATGTGAAAGACGGGGTGCGAGAGAGATCCATCCCACTGGAAGCTTCTGAGTGTCACAAGGTGAAGGAAGGACATCTTGTATTGTGTTTCCTGGTAAAATCTGATTATGCCCTCTACTGCGATGCCCGTGTTTTGAGAATCGAGAGGAGGGTACATGATAGCAAAGAGTGTACCTGCACCTTCACTGTCCGGTTTTACCATGACAATTCTGAGGAAGAGGTTCGTTGGGACAATTTGTGCTGTAGACCAACACAAGAAGAAGCTGAGGTCCCCTTAGAACCTTTCATGGATCCCATAGCGACCTTGTGGGGATGA 798 0.4248 MKELTLNESPFLNLSMDEILELERAYNGAREKSLDQSFCMEIATSLSSLSNKKSLSWEQVQQWFHNKHREATGQVASSVEGLSLYVDLLDESSSRKEHKISPNPKGIKAEDLSELGYESISIKDKAWHDVAMFLNYRVLSTGELEARVRYLGFGKEEDEWVNVKDGVRERSIPLEASECHKVKEGHLVLCFLVKSDYALYCDARVLRIERRVHDSKECTCTFTVRFYHDNSEEEVRWDNLCCRPTQEEAEVPLEPFMDPIATLWG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01432 265 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 12 248 IPR039276 -
Vifa4g01432 265 Pfam SAWADEE domain 115 241 IPR032001 GO:0003682
Vifa4g01432 265 Gene3D - 174 246 - -
Vifa4g01432 265 Coils Coil 12 32 - -
Vifa4g01432 265 Gene3D - 112 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01432 Vifa-Chr4 424117040 424122996 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vifa4g01432 SAWADEE 9.1e-36 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01432 - - gmx:100799110 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01432 4 424117040 424122996 Vifa4g01432 4 424117040 424122996 ECH