Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01419 ATGATTTTGCTTGATTTCTACTTCTTTGTCTGCTCTCAGAAGGCAAGGAAAGCTCTTAGAGCGTTGAAAGGTTTGGTTAAGATACAAGCTCTTGTTAGAGGCTATCTTGTTAGGAAAAGAGCTGATGCAACTCTTCATAGTATGCAAGCTTTGATTAGAGCTCAAAATTCGGTTAGATTGCAAAGAGCTCGTCGATCCATGAGCAAAGAAAATCGGTTTCTATCTGAAAATCTTGCAAGAAAATCTCTGGAACGATATGACGAAACACGTAGCGAATTCCACAGCAAAAGAGTACCAACATCTTATGAAACACCATTGAATGGATTTGATGAAAGTCCAAAGATAGTCGAAATCGACACATACAAAACCAAATCGAAATCTAGAAGATTCACCTCAACAATGTCCGAATACGGAGAAGAATTACCACCATGTCACGCAACAATTTCATCACCTCTTCCAACCAGAATCTCAGTTCCCGATCACCGAAACCATCAACAACAGCAAGACTTTGATTGGTACTTCAACAATCTCGAAGAGTGTAGGTATCCAACAACGCATAACACGCCTCGCTTCAACCATTCGTCTTCAAAGCTTCCTCCAAATACACCATCAAAAAGTGTTTGTGGCGGAGAAAGCACTTGTTATAGACCTTATGATTACTCGAATTTTCCGAATTACATGGCGAATACTCAGTCATTTAAGGCAAAGTTAAGGTCTCATAGTGCTCCTAAACAAAGACCAGAAACACAACAAGAAGAAGAGTCTTGGAACTTTTGA 777 0.3964 MILLDFYFFVCSQKARKALRALKGLVKIQALVRGYLVRKRADATLHSMQALIRAQNSVRLQRARRSMSKENRFLSENLARKSLERYDETRSEFHSKRVPTSYETPLNGFDESPKIVEIDTYKTKSKSRRFTSTMSEYGEELPPCHATISSPLPTRISVPDHRNHQQQQDFDWYFNNLEECRYPTTHNTPRFNHSSSKLPPNTPSKSVCGGESTCYRPYDYSNFPNYMANTQSFKAKLRSHSAPKQRPETQQEEESWNF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01419 258 PANTHER IQ-DOMAIN 5-RELATED 15 249 - -
Vifa4g01419 258 MobiDBLite consensus disorder prediction 235 258 - -
Vifa4g01419 258 Pfam Protein of unknown function (DUF4005) 188 254 IPR025064 -
Vifa4g01419 258 ProSiteProfiles IQ motif profile. 23 50 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01419 Vifa-Chr4 421036894 421038434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01419 15 248 IQD Protein Family AT3G16490 52.459 4.75e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01419 - - gmx:100797686 333.569