Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01413 ATGATGAACATGAATATCAAAGAAACATTTGTTTTACTCTTTTCATCTTTCTTATTCCTAACTTGTGGCTATGCACAAGATACTATTGTACCAGCTATCATCACATTTGGTGACTCTGCAGTGGATGTAGGGAATAATAACTACCTTCCTACTCCTTTTAAGGCTAACTATCCTCCTTATGGGAAAGATTTTGTTAATAAACAGGCTACTGGAAGGTTTTGCAACGGCAAATTAGTTACTGATATTACAGCTGAAACACTTGGTTTTAAGAGTTCTGCACCTGCATATCTCAGTCCACAGGCATCAGGGAAGAACCTCCTTACTGGAGCAAGCTTTGCTTCAGCTGGATCTGGTTATGATGAAAAGGCTGCTAAATCGAATCATGCACTTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATATCAAGGCAAGTTGGCAAAGGTTGCTGGCAGTAAAAAAGCTGCATCAATTATCAAGGGTTCATTGTACATATTGAGTGCTGGAAGCAGTGATTTCGAACTAAATTATTATGTTAATCCTTGGATCAACAAAGCAATCACCGTTGATCAGTATTCATCTTACCTACTAGCCTCATTCAACACCTTCATTAAGGGTTTGTATGGATTAGGAGCTAGGAAAATTGGAGTGAATTCACTTCCACCATTGGGGTGCCTACCAGCTACAAGGACTTTATTTGGTCACCATGAGAAGGGTTGTGTCACAAGAATCAACACTGATGCACAAGGATTTAACAAGAAAATCAACTCAACTGCATCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTGGTTTTCGATATTTACAAGCCTCTCTACGACCTCGTTCAAAACCCCTCAAATTTCGGTTTCGCTGAGGCAGGGAGAGGTTGTTGCGGTACAGGAACGGTAGAGTTAACACCATCAGTATTGTGCAATTCGAAATCAACAGGAACTTGTTCTAATGCAACTAAGTATGTGTTTTGGGATAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTCTAGCTGACTCTTTACTTCTACAAGGCATATCTCTCATCACATAA 1071 0.395 MMNMNIKETFVLLFSSFLFLTCGYAQDTIVPAIITFGDSAVDVGNNNYLPTPFKANYPPYGKDFVNKQATGRFCNGKLVTDITAETLGFKSSAPAYLSPQASGKNLLTGASFASAGSGYDEKAAKSNHALPLSQQLSYFKEYQGKLAKVAGSKKAASIIKGSLYILSAGSSDFELNYYVNPWINKAITVDQYSSYLLASFNTFIKGLYGLGARKIGVNSLPPLGCLPATRTLFGHHEKGCVTRINTDAQGFNKKINSTASNLQKQLPGLKIVVFDIYKPLYDLVQNPSNFGFAEAGRGCCGTGTVELTPSVLCNSKSTGTCSNATKYVFWDSVHPSEAANQVLADSLLLQGISLIT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01413 356 SUPERFAMILY SGNH hydrolase 153 347 - -
Vifa4g01413 356 CDD SGNH_plant_lipase_like 31 348 IPR035669 -
Vifa4g01413 356 PANTHER GDSL ESTERASE/LIPASE EXL3 18 347 - -
Vifa4g01413 356 FunFam GDSL esterase/lipase APG 22 352 - -
Vifa4g01413 356 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Vifa4g01413 356 Gene3D SGNH hydrolase 23 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01413 Vifa-Chr4 418890580 418892572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01413 4 348 Pollen Coat Proteome AT1G75910 37.249 1.99e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01413 - - vun:114167332 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01413 4 418890580 418892572 Vifa4g01413 4 418890580 418892572 ECH
Vifa5g00246 5 34569444 34570863 Vifa4g01413 4 418890580 418892572 PCT