Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01412 ATGGTGAAAATGAGTATCAAAGAAACACTTGTAGTACTCTTTGCATCTTTCTTGTTCCTATCTTGTGTCTATGCACAAGATACTATTGTACCAGCTATCATCACATTTGGTGATTCTGCGGTCGATGTAGGGAATAATGACTACCTTCCTACTCTTTTTAAGGCTAACTATCCTCCTTATGGGAGAGATTTTGTTAACAAACAGGCTACTGGAAGGTTCTGCAATGGTAAATTAGCTACTGATATAACAGCTGAAACACTTGGTTTTAAGAGTCCTGCACCTGCATATCTCAGTCCACAGGCATCAGGGAAGAACCTCCTTACTGGAGTAAACTTTGCTTCAGCTGCATCAGGTTATGATGAAAAGGCTGCTGCGTTGAATCATGCACTTCCATTGTCGCAACAGTTAAGTTATTTCAAGGAATATCAAGGCAAGTTGGCACAGGTTGCTGGCAGTAAAAAAGCTGCATCAATCATCAAGGGTTCATTGTACTTATTGAGTGCTGGAAGCAGTGACTTTGTACAAAATTATTATGTCAATCCTTGGATCAACAAAGCAATCACTGTGGATCAGTATTCATCTTACCTACTAGACTCATTCAACACCTTCATTAAGGGCTTGCATGGATTGGGAGCAAGGAAAATTGGGGTGACTTCACTTCCACCATTGGGGTGCCTACCAGCTGCAAGAACTTTATTCGGTCAACATGAGAGTGGTTGTGTCTCAAGAATCAACGCTGATGCACAGGGATTTAACAAGAAAATCAACTCAGCTGCATCAAACCTTCAAAAGCAACTTCCAGGTCTTAAGGTTGTGATTTTCGATATTTATAAGCCTCTCTATGACCTCGTTCAAAACCCTTCAAATTTCGGTTTTGCTGAGGCAGGGAGAGGTTGCTGCGGTACAGGAACGGTAGAGTTAACATCGTTATTGTGCAATCAACATTCAATAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTCTCGCTGATTCTTTACTCGTACAAGGCATATCTCTCATCACATAA 1068 0.4101 MVKMSIKETLVVLFASFLFLSCVYAQDTIVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNKQATGRFCNGKLATDITAETLGFKSPAPAYLSPQASGKNLLTGVNFASAASGYDEKAAALNHALPLSQQLSYFKEYQGKLAQVAGSKKAASIIKGSLYLLSAGSSDFVQNYYVNPWINKAITVDQYSSYLLDSFNTFIKGLHGLGARKIGVTSLPPLGCLPAARTLFGQHESGCVSRINADAQGFNKKINSAASNLQKQLPGLKVVIFDIYKPLYDLVQNPSNFGFAEAGRGCCGTGTVELTSLLCNQHSIGTCSNATQYVFWDSVHPSEAANQVLADSLLVQGISLIT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01412 355 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vifa4g01412 355 SUPERFAMILY SGNH hydrolase 150 346 - -
Vifa4g01412 355 PANTHER GDSL ESTERASE/LIPASE EXL3 18 346 - -
Vifa4g01412 355 FunFam GDSL esterase/lipase APG 23 351 - -
Vifa4g01412 355 Gene3D SGNH hydrolase 21 350 IPR036514 -
Vifa4g01412 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Vifa4g01412 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01412 Vifa-Chr4 418887259 418889134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01412 4 347 Pollen Coat Proteome AT1G75910 36.599 1.26e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01412 - - vun:114167332 589.341