Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01367 ATGACCACGTTCAAGAAAAACAGGAAGAAGAGAGGCCATGTCAGCGCCGGTCATGGTCGTATCGCAAAACACCGTAAGCATCACGGAGGTCGCCGTGACAATGGAGGTTCAAGTTCTTTGTTTTCACTTCCGTATTGTTTGCATCTACGTTTTCACTACCCATGTTCATTTAATTTTTCATGTCCTGATATGCAAATCACGGCGTCACAGAAGGCGATGGCGGTTGAAGATGTTGATTCACGGGAACCGAGATGGCAGACGGTATTGGATTCTTTTAACGAGGGAGAAGTGATTGTTGACGTGATTCGATCTCTTATGTCAATATTGGAAAGAACACACACCTTTTGGAAGTGCTTGATGATTTGTCTCATAATATTCCTGGTGATTATGAGTTGCTTTCCTCCATGA 408 0.4363 MTTFKKNRKKRGHVSAGHGRIAKHRKHHGGRRDNGGSSSLFSLPYCLHLRFHYPCSFNFSCPDMQITASQKAMAVEDVDSREPRWQTVLDSFNEGEVIVDVIRSLMSILERTHTFWKCLMICLIIFLVIMSCFPP 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01367 135 SUPERFAMILY Ribosomal proteins L15p and L18e 5 45 IPR036227 -
Vifa4g01367 135 MobiDBLite consensus disorder prediction 1 31 - -
Vifa4g01367 135 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01367 Vifa-Chr4 407612559 407614013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01367 2 36 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 82.857 6.83e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01367 K02900 - ming:122078451 66.2402