Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01366 ATGGACACTACTTGGATTCTGTTTGTGACACCAATTTTCTTGTGCACTTTGTTCCTCTACTGCAGAAACAGGCTTTGTCTTAAGCTCAAACCAAAATACAGAAATCAGCTTCCACTAGGCACTCTTGGATGGCCTTTTATTGGTGAAACCATAGAGTTTGTTTCTTGTGCTTACACCGATCGCCCTGAAAGCTTCATGAACAAGCGACGTGCCATGTATGGTAAGGTATTCAAGTCACACATATTTGGAAGTCCTACCATTATTTCAACAGATGCAGATGTGAACAAGTTCATACTACAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAATCATTGATGGAGTTAATGGGAGAGTCTTCTATTTTGCTCATCAATGGAGCCTTACAAAGGAGAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGTTAAAGATTCAGATTACAACAGATATGGAGAAATATGTTAAAGAATCAATGGTGAATTGGAAAGAGGGCCAACCTATATACATACAAGATGAAACAAAAAAGATTGCATTTCATGTGCTAGTCAAGGCATTGATTAGTTTGGATCCAGGTGATGAAATGGAACTTCTGAAAAACCATTTTCAGGAATTTATCTCTGGCCTCATGTCTTTGCCAATAAACCTACCAGGAACAAAACTTTATCAATCTTTAGGAGCAAAGAAGAAAATGGTGAAACTAGTGAGTAAAATTATCCAAGCTAGAAGAAATAAAGGTGTCAAGGAAGTTCCAAAAGATGTAGTAGATGTGCTTCTTAACGATACAAGTGAGAAATTGACCAATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGACTCAGTTCCAGTTCTTATGACTCTAGCTACTAAGTATCTTTCAGAATGCCCTGCTGCTTTGCAACAATTGACGGAGGAAAATATAAAGCTTAAGAAACTCAAAGATCAGCTTGGGGAGCCATTGTGTTGGAGTGATTACTTATCATTGCCATTTACTCAAAAAGTTATAACAGAAACTTTGAGGATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAATTATGAGTGTCCTTATCAATTCAATCCATGGAGGTGGCAAAATAAGGACATGAACAATTCCAATTTTAGTCCTTTTGGAGGGGGACAAAGGCTGTGTCCTGGTATTGATTTGGCCAGGCTAGAAGCTTCCATCTATCTACATCACCTTGTTACTCAATTTAGATGGTATGCCGAAGAAGATACAATAGTGAACTTCCCAACAGTAAGAATGAAAAGAAGGATGCCCATCTTAGTAAAGAGAGTGGAAACTTAA 1425 0.3691 MDTTWILFVTPIFLCTLFLYCRNRLCLKLKPKYRNQLPLGTLGWPFIGETIEFVSCAYTDRPESFMNKRRAMYGKVFKSHIFGSPTIISTDADVNKFILQSDAKVFVPSYPKSLMELMGESSILLINGALQRRIHGLIGAFFKSQQLKIQITTDMEKYVKESMVNWKEGQPIYIQDETKKIAFHVLVKALISLDPGDEMELLKNHFQEFISGLMSLPINLPGTKLYQSLGAKKKMVKLVSKIIQARRNKGVKEVPKDVVDVLLNDTSEKLTNDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENIKLKKLKDQLGEPLCWSDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQNKDMNNSNFSPFGGGQRLCPGIDLARLEASIYLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVKRVET 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01366 474 CDD CYP90-like 69 471 - -
Vifa4g01366 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Vifa4g01366 474 Gene3D Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 472 - -
Vifa4g01366 474 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01366 474 PANTHER CYTOCHROME P450 26 35 447 - -
Vifa4g01366 474 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01366 Vifa-Chr4 407388523 407390835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01366 36 445 Cytochrome P450 AT3G13730 68.193 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01366 K12638 - gmx:100797868 813.142