Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01342 ATGAAGAGTCCATCGTTGTACATGGGGACTGATGACTTGGTTGTCTCGCCAAGTTCTGATGTGTATGTTCTTTCATTTTTGAGTAATTTGGAGATTCTTTCTTCTGATTTGGAGGAGAGAATGGTCACCATTGAAAAATTTGAGGGTCTTAACATTTTGAAAGCTTCTGTGATGTCATCTTCTGCTCGGACTAATGATCTTATCCATTTCTTAAAGTCAAGGATGAGAATTCTTAGTGAAGGAAAGTTTATGGTTTCTGGTAATTTTCTAGGCAATGAAAATACTAAATATTGTCTCACTTTAAATATTTCAGTTGGAGTTATTTTAGCCATTCAACCTTTTAACTATCCTGTCAACCTTGCTGTCTCGAAAATTGCTCCCGCATTGATTGCTAGAAGTTCTATTGTGCTTAAGCCTCTAACTCAGGGAGCTATTGCTGCTTTGCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGATATGTTATTGGAAAAGGCTCGGAAATTGGAGACTTTCTTACAATGCATCAAGGAGTTAACTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGCCAGGTATGATTCCTCTACTAATGGAATTGGGAGGAAAAGATTCTTCCATTGTGCTTGAAGATGTTGATCTTTATTTGGTTATTGCAAACATCATAAAAGGAGGTTTTTCATTCAGTGGTCAGAGGTGTACTACTGTGAAGGTTGTTCTGGTAATGGAATCAGTTGTTGGCGCATTGGTTGAGAAAGTAAAGGTTAAGGTAGCAAAACTAAGCGTTGAACCACCCGAGAATGAATCTGAGATCACAACAGTTGTATCAGAATCATCGGCCAATTTCATTGAAGGCTTGGTGAATGATGCTAAAGAGAAAGGTGCGACATTCTGTCAAGAATACAAGAGAGAAGGGAATATCATTTGGCTTTTGTTACTTGATAATGTTAGACGAGACATGAGAACTGCATGGGAAGATTCTATTGGATCACTAGGTGGATTGCCCTTATTTTTGTCAATGATAATGTTTCCATTAGATCCTTTCATGCTACAAAGAAAAGCATTATTGTTGTCTCTATTGTACATAGCTTTATGGGAATGGCTATTCATTCAAGGCATGGTTCATATATTTTCCTCCCTATTTATAGAGTTGGAAGTTTTATAA 1197 0.3751 MKSPSLYMGTDDLVVSPSSDVYVLSFLSNLEILSSDLEERMVTIEKFEGLNILKASVMSSSARTNDLIHFLKSRMRILSEGKFMVSGNFLGNENTKYCLTLNISVGVILAIQPFNYPVNLAVSKIAPALIARSSIVLKPLTQGAIAALHMVHCFHLAGFPKGLIRYVIGKGSEIGDFLTMHQGVNCISFTGGDTGIAISKKPGMIPLLMELGGKDSSIVLEDVDLYLVIANIIKGGFSFSGQRCTTVKVVLVMESVVGALVEKVKVKVAKLSVEPPENESEITTVVSESSANFIEGLVNDAKEKGATFCQEYKREGNIIWLLLLDNVRRDMRTAWEDSIGSLGGLPLFLSMIMFPLDPFMLQRKALLLSLLYIALWEWLFIQGMVHIFSSLFIELEVL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01342 398 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 214 340 IPR016163 GO:0016620
Vifa4g01342 398 SUPERFAMILY ALDH-like 81 340 IPR016161 GO:0016491
Vifa4g01342 398 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 211 IPR016162 GO:0016491
Vifa4g01342 398 Pfam Aldehyde dehydrogenase family 81 340 IPR015590 GO:0016491
Vifa4g01342 398 Pfam Protein of unknown function (DUF674) 1 46 IPR007750 -
Vifa4g01342 398 PANTHER ALDEHYDE DEHYDROGENASE 73 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01342 Vifa-Chr4 398269074 398270270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01342 63 342 Aldehyde Dehydrogenase Gene Family AT2G24270 75.445 4.40e-151 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01342 K00131 - gmx:100789100 418.698