Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01327 ATGGCTAACAGAACACTATCAACCTCTTACTCTAACAAAAAACACGACGTATTCCTCAGTTTCAGAGGCGAGGACACTCGGATCGGTTTCACAAGCCATCTTTATGATGCTTTCAATCACAAATCAATCAAAACATACATAGATTACCTCCTAAAGAGAGGAGAAGATGTTTGGCCAACACTTTCTGAAGCCATTGAGGATTCACATGTCTCCATAGTTGTGTTCTCAAAAAACTACGCTTCTTCTAAATGGTGTTTGGAAGAGCTTGTTAAAATACTTGAATGCAGAAAAGTTCGCGGACAAGTTGTTATACCTGTTTTCTATAAAACAGATCCGTCTGATATTAGAAATCAGACTGGGAGTTATGAGAAAGCGTTTGCTAAACATGAGAGGGATCTTGGAAATAGTGAAAGGGATGATTCTAAACAAAAAGTGCTTAGTTGGAAAGCTGCTCTTACTGAAGCTGCCAATATTTCTGGATGGGACTCCAAAACACACAAGGATGAATCTAACCTCATTGAGAACATTGTCAATGATGTGTTGCAAAAGCTACAACTGAGGTATCCTAATGAACTAGAAGGTATTGTTGGGACTGAAAATTTTTGTGGAGTGGTAGAAACATTAATGACAAGTATTCAGATACTTGGAATTTGGGGTATGGGTGGAATGGGAAAGACAACCATTGCTAAAGTATTGTTTGCCAAATTCTTTGCCCAATATGACCATGTATGCTTTGCTAATGCAAAAGAATATTCACTCAGCAAGCTTCTCTCTGAGCTACTCAAGGAAGAAATTTCACCATCTATTGTTGTAGGAACTACATTCCATATGAGGAGGCTGAGAAGTAAAAAGGTTTTCATTATACTTGATAATGTGGACAGTTTAGATCAGTTTGAATATTTATGCAGGGATTTCAGCGACCAAAGTAAGGATAGTAGACTCATTATAACAACGAGAGACAGACAATTGCTCAATGAAAGAGTTCATAAGATATATGAGGTCAAGCAATGGGAAGATAAAGAATCACTAGAGCTTTTTAGCTTAGAAGCCTTCAAACAAAGCCATCCCCGAAAGGGTTACGAGGATCTTTCGCAAAGGGCAGTTGCTTATGCAGGAGGCATTCCACTTGCTCTCAAAGTTTTGGGTTCAAATCTCCGATCAAAAGGTACTGAGTTTTGGGAAAGTACTTTCAGAAAACTCGACAAGTTTCCAAAACAAGAAATTCAAAAAGTTTTAAAAGTGAGCTATGATGGATTAGATCGACTAGAGCAGAAGATATTTCTAGACATTGCATTTTTTTTCAAAGGAGAAAAGAAAGATCATGTCATAAGGATACTAAATGCTTGTGGGTTGGAGGCAAGTAGTGGAATAGAAGTCCTAGAAGACAAGGCTTTGATAACTATTTCAAATGGAAATAGAATACAAATGCATGACTTGCTAAAAAAAATGGGTTCAGACATAATGCGTAAAGGTAAGAGAGGAAGGAACAAGGTAAACCCTGCAACTCATACACGATTGAGCGGGAGTGAAGCGCTTGAAGTAATTAAAGAAAACAAGGGGACTAGTTCAATTGAAGGCATAACACTGGATTTGTCTCAAAATAATGAGTTGCCTTTATGTTCCGACACATTCACCAAGATGAAAGCCTTGAGAATTCTTAAATTCTATATCCCATTGGGTCAGAGTTGTAGTAATGCATACCTCAACCTTCCCATGGAACTCAAGCCATTTTCTAGTGAACTGAGGTACTTTGAGTGGATTGGATACCCTTTTGAGACACTTCCACAACCTTTTTGCGCCAAGTTGCTTGTTGAGATTCGTATGCCGCATAGTAATGTTAAACGACTATGGCAGGGGATGCAGGACCTTGATAAACTAGAGGTGATTGATCTAGGTGAATGCAAACATTTAGTTCAGCTTCCGGATTTGTCTAAGGCATCAAAACTTAAATGGGTTAATCTCTCCGGTTGTGTGAGTCTGGTGGATCTTCATCCATCTGTTTTTTTGGCTGAAACACTTACTACTCTGATACTTGATGGGTGTACAAAGCTTAGGGGCGTTAGAGGTCAGAAACATTTAAAATTTTTGGAAACGATCAGTATCAATGGCTGCACAAGTCTCGAGGAATTTGCCATCTCCTCGGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGGATTCAAACACTTGACCTATCTATTGGGCTTCCTCACAATCTTAAGCGGCTTAATCTTGAGGGTTCAAGACTTGAGCATCTTCCAAAGGAGTTACCTAGACTGACATCTATGAAGGAGCTTAGGATTTCTGGCAGAGGACTAAAAGTTAAGAAACAGCAGCTAGATGCCTTGTTTGATGGCTTACGGTCCCTACAAGTACTACATTTGAGGGATTGTAATAACTTGTTTGAACTCCCTGACAACATCAGTGTCCTATCACAATTACAGGAATTAATTCTAGATGGAAGCAACTTGAAAAGTTTGCCTGAAAGCATCAGGAATCTTCATGAGCTAGAAATTCTGTCATTGGAGGGTTGTAGGGAGATTCAGTACCTTCCAGAGCTCCCCTCTCTCATCAAATTGTTAAATGCCAGTAACTGCACGTCCCTGGTTTCAGTTTCAGATTTAAAAACTATTGCATCAAAGATGATGGGAAATGCCAAATACATTTCATTCAGGAACAGCTTGAATTTGGAGGAACATAAAGTCAAACATATAACGGAAAGTCTCAATTTAACAATGATGAGCGCTGCATTTCAAAATGTATCTGTTAGAAGATTTCGCGTGGATGTTCACAGCTACAACTATACCAGTGTTGATGCTTGTCTACCAGGAACAAGGGTCCCAAGACAGTTCAAATATCAAATTACAACCGAGTCCTCCATTACCATTGAACTTCCTAATCATTCGAGCATACTGGGATTTCTTTACTCAGTGGTTCTTTCTCCAGCAGGTGGAATGAAGAAGGGTGGGACTATAATAAAATGTCGATGCGATTTGGGAGAAAAAGCATTCTCAAATTTTATGAACCAAAGCTTTGTTTTGAGTTTCGTGTTACTAATGATATGGAGGAAGTTGATGGTTCAATCTAGAAAAGAGTTGAATAAGGCTGTGCGATTAGAATCAGGATGTAGGATAACCTTGAAGCCAATTGAAAAGCATTCTACAAGCATTATACAAGACTTAGACTCAGAGATGGTTGAACCAGAGACAAATTCTAATTTAGTTTCAGAAATACAAACCAAGTCCAGTGCTGCAAGTGGTAGCAAGAAGAATGCCAAAAACTCTACAGAAGTTGTCAAAAGCAAAGGAAATAAAGGGACGCTAATTGAACCCGATGATGAATTATCTGAATTCGTTGGGTCACAGTTGGACAAAGCAAGTGAATCTAATGAAAAATCAAAACCAACATCGGCAATGGTTAAACACGAATCATTTGAAGAAGATAATGATAATGAAAGCCACTTCTTTAATGTGGAGAAGAGCATCAGATCTTCTAACAAAGAAACCAATACCAATGCTGGAACCAGTCATGAGGAGGATATTACCAACTCTGCAAAAGTTTTCAGAAGCAAAGGAAATGAAGGAAAACCATCTCAATCTGAAGCTGAATTTCATCTACTGGTAACGTCATCTGTTGAAGACAATGCTCCTGATAACAAACCGGGTGAAAACAACTATGATTGGCAAGATAATTTTGACGAGGCCAAGAATTCCGAAGAAAAACCAAATATAGAAGGACAAATCACTGTTCCTGACACCAATGTTCTGATAAGTGAACCAGAACAAGAAAAAGAAAGTGCACCAATAGTGAATCATAGCGAACCTGAAGGTGATCAAGAAGATGGATCAGATGAGGACCCTTTTTCTGAGCTTGAGAGCATTCTGTTGGGAAGTCCAGAGTCCTCACCAAAAGCAACATGTTCCACAAATGATGATGCTGTAAGAGAAGCTTTGCATAACCTTAAATGCCTATTGGAAAATTCACTTGAGTCCATTCTTGGTGATCTTGAGCTACAACGGCAACTACATATGTCTTTTGAATACATAAAACAAGCATCACATGAAAATGTTTCTCCTAATATTGTGAACCTTGTCCAGAAAATGACATCCTCTATTGAGAACCTTTTCAAAGACTTTGCCACGACTAAAAAAGTGGTTGAGGATCACATTAATGCTTTGAAACAAAAAGAAAAGCTCATGCAGCGAGTGAGAGATGTTAAGAAACAAAAGGAATCAAAACAGAAAGAAAAGAGACGGTTGGAAAATGAAGCCAAACGTCTCAAGGAAGAGGGTGAAAAGGTGGATGAAAAAATTCGAACTCTTGTTGAGCAAAAGAAAAGTATTGAGTTGGAAATAACCAAGTCGAATGAGAGCATGGAAATATGTGAAGGTGAAAAGCAGAAAGTGAAAAATGAGGCTAAGAATATGATAACTGAAAGCAAAGAGCTTATGTTGAGTGTTAAAAATTCTAAATCTTCATATGGTGCCGCCTTGTCAAAGCAACAAAAGTTAAGAGACAAATGGGAAGGTTTCAGAATAGATTTTGCAGACGACTTTGGAAGTAGCAGTACTTGA 4575 0.384 MANRTLSTSYSNKKHDVFLSFRGEDTRIGFTSHLYDAFNHKSIKTYIDYLLKRGEDVWPTLSEAIEDSHVSIVVFSKNYASSKWCLEELVKILECRKVRGQVVIPVFYKTDPSDIRNQTGSYEKAFAKHERDLGNSERDDSKQKVLSWKAALTEAANISGWDSKTHKDESNLIENIVNDVLQKLQLRYPNELEGIVGTENFCGVVETLMTSIQILGIWGMGGMGKTTIAKVLFAKFFAQYDHVCFANAKEYSLSKLLSELLKEEISPSIVVGTTFHMRRLRSKKVFIILDNVDSLDQFEYLCRDFSDQSKDSRLIITTRDRQLLNERVHKIYEVKQWEDKESLELFSLEAFKQSHPRKGYEDLSQRAVAYAGGIPLALKVLGSNLRSKGTEFWESTFRKLDKFPKQEIQKVLKVSYDGLDRLEQKIFLDIAFFFKGEKKDHVIRILNACGLEASSGIEVLEDKALITISNGNRIQMHDLLKKMGSDIMRKGKRGRNKVNPATHTRLSGSEALEVIKENKGTSSIEGITLDLSQNNELPLCSDTFTKMKALRILKFYIPLGQSCSNAYLNLPMELKPFSSELRYFEWIGYPFETLPQPFCAKLLVEIRMPHSNVKRLWQGMQDLDKLEVIDLGECKHLVQLPDLSKASKLKWVNLSGCVSLVDLHPSVFLAETLTTLILDGCTKLRGVRGQKHLKFLETISINGCTSLEEFAISSDLIENLDLSSTGIQTLDLSIGLPHNLKRLNLEGSRLEHLPKELPRLTSMKELRISGRGLKVKKQQLDALFDGLRSLQVLHLRDCNNLFELPDNISVLSQLQELILDGSNLKSLPESIRNLHELEILSLEGCREIQYLPELPSLIKLLNASNCTSLVSVSDLKTIASKMMGNAKYISFRNSLNLEEHKVKHITESLNLTMMSAAFQNVSVRRFRVDVHSYNYTSVDACLPGTRVPRQFKYQITTESSITIELPNHSSILGFLYSVVLSPAGGMKKGGTIIKCRCDLGEKAFSNFMNQSFVLSFVLLMIWRKLMVQSRKELNKAVRLESGCRITLKPIEKHSTSIIQDLDSEMVEPETNSNLVSEIQTKSSAASGSKKNAKNSTEVVKSKGNKGTLIEPDDELSEFVGSQLDKASESNEKSKPTSAMVKHESFEEDNDNESHFFNVEKSIRSSNKETNTNAGTSHEEDITNSAKVFRSKGNEGKPSQSEAEFHLLVTSSVEDNAPDNKPGENNYDWQDNFDEAKNSEEKPNIEGQITVPDTNVLISEPEQEKESAPIVNHSEPEGDQEDGSDEDPFSELESILLGSPESSPKATCSTNDDAVREALHNLKCLLENSLESILGDLELQRQLHMSFEYIKQASHENVSPNIVNLVQKMTSSIENLFKDFATTKKVVEDHINALKQKEKLMQRVRDVKKQKESKQKEKRRLENEAKRLKEEGEKVDEKIRTLVEQKKSIELEITKSNESMEICEGEKQKVKNEAKNMITESKELMLSVKNSKSSYGAALSKQQKLRDKWEGFRIDFADDFGSSST 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01327 1524 Coils Coil 1389 1444 - -
Vifa4g01327 1524 Gene3D Ribonuclease Inhibitor 715 909 IPR032675 -
Vifa4g01327 1524 Gene3D - 184 335 IPR027417 -
Vifa4g01327 1524 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Vifa4g01327 1524 Gene3D - 9 183 IPR035897 -
Vifa4g01327 1524 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 186 - -
Vifa4g01327 1524 Gene3D - 337 420 IPR042197 -
Vifa4g01327 1524 Pfam TIR domain 14 190 IPR000157 GO:0007165
Vifa4g01327 1524 PRINTS Disease resistance protein signature 214 229 - -
Vifa4g01327 1524 PRINTS Disease resistance protein signature 621 637 - -
Vifa4g01327 1524 PRINTS Disease resistance protein signature 371 385 - -
Vifa4g01327 1524 PRINTS Disease resistance protein signature 279 293 - -
Vifa4g01327 1524 SMART till_3 14 158 IPR000157 GO:0007165
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1079 1183 - -
Vifa4g01327 1524 Gene3D Ribonuclease Inhibitor 515 714 IPR032675 -
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1079 1102 - -
Vifa4g01327 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 430 IPR027417 -
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1158 1183 - -
Vifa4g01327 1524 Pfam NB-ARC domain 204 420 IPR002182 GO:0043531
Vifa4g01327 1524 Coils Coil 1459 1479 - -
Vifa4g01327 1524 SUPERFAMILY L domain-like 529 853 - -
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1127 1157 - -
Vifa4g01327 1524 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 161 IPR035897 -
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1260 1288 - -
Vifa4g01327 1524 MobiDBLite consensus disorder prediction 1403 1431 - -
Vifa4g01327 1524 SUPERFAMILY "Winged helix" DNA-binding domain 407 490 IPR036390 -
Vifa4g01327 1524 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 711 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01327 Vifa-Chr4 395084155 395102387 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01327 776 874 WRKY Transcription Factor Family AT4G12020 35.577 3.59e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01327 - - cam:101515491 2149.78