Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01325 ATGGCTAAAAGAGCATTATCAACCTCTTACTCTAACAAAAAACACGATGTTTTTCTCAGTTTCAGAGGCGAGGACACTCGAATCGGTTTCACAAGCCATCTTTATGATGCTTTGAATCACAAATCAATCAAAACATACATAGATTACCTCCTAAAGAGAGGAGAAGATGTTTGGCCAACACTTTCTGAAGCCATTGAGGATTCACATGTCTCCATAGTTGTGTTCTCAGAAAACTACGCTTCTTCTAAATGGTGTTTGGAAGAGCTTGTTAAAATACTTGAATGCAGAAAAGTTCGCGGACAAGTTGTTATACCTGTTTTCTATAAAACAGATCCGTCTCATATTAGAAATCAGACTGGGAGTTATGAGAAAGCATTCGCTAAACATGAGAGAGATCTTGGAATTAATGAAAGTGATGATTCTAAACGTAAAGTGCTTAGTTGGAAAGCTGCTCTCACTGAAGCAGCCAATATTTCTGGATGGGACTCCAAAACTCACAAGGATGAATCTAACCTCATTGAGAATGTTGTCAATGATGTATTGCAAAAGCTACAACTGAGGTACCCTAATGAACTAGAAGGTATTGTTGGGATTGAAAAATTTTGTGGAGTGGTAGAAACATTAATGACAAGTATTCAGATGCTTGGAATTTGGGGTATGGGTGGAATGGGAAAGACAACCATTGCTAAAGTATTGTTTGCCAAATTCTTTGCCCAATATGACCATGTATGCTTTGCTAATGCAAAAGAATATTCACTCAGCAAGCTTCTCTCTGAGCTACTCAAGGAAGAAATTTCACCATCTATTGTTGTAGGAACTACATTCCATATGAGGAGGCTGAGAAGTAAAAAGGTTTTCATTATACTTGATAATGTGGACAGTTTAGATCAGTTTGAATATTTATACAGGGTTTTCATTATAACAACGAGAGACAGACAATTGCTCAATGAAAGAGTTCATAAGATATATGAGGTCAAGCAATGGGAAGATAAAGAATCACTAGAGCTTTTTAGCTTGGAAGCCTTCAAACAAAGCCATCCCCGAAAGGGTTACGAGGATCTTTCGCAAAGGGCAGTTGCTTATGCAGGAGGCATTCCACTTGCTCTCAAAGTTTTGGGTTCAAATCTCCGATCAAAAGGTACTGATTTTTGGGAAAGTACTTTCAGAAAACTCAACAAGTTTCCAAAACAAGAAATTCAAAAAGTTTTAAAAGTGAGCTATGATGGATTAGATCGACTAGAGAAGAAGATATTTCTAGACATTGCATTTTTTTTCAAAGGAGAAAAGAAAGATCATGTCATAAGGATACTGAATGCTTGTGGGTTGGAGGCAAGTAGTGGAATAGAAGTCCTAGAAGACAAGGCTTTGATAACTATTTCAAATGGAAATAGAATACAAATGCATGACTTGCTAAAAAAAATGGGTTCAGACATAATGCGTAAAGAATGTGGCATAAACCCTGCAACTCATACACGATTGAGCGGGAGTGAAGCGCTTGAAGTAATTAAAGAAAACAAGGGGACTAGTTCAATTGAAGGCATAACACTGGATTTGTCTCAAAATAATGAGTTGCCTTTATGTTCCGACACATTCACCAAGATGAAAGCCTTAAGAATTCTTAAACTCTATATCCCATTGGGTCAGAGTTGTAGTAATGCACACCTCAACCTTCCCATGGTACTTGAGCCATTTTCTAGTGAACTGAGGTACTTTGAGTGGATTGGATACCCTTTTGAGACACTTCCACAACCTTTTTGCGCCAAGTTGCTTGTTGAGATTCGTATGCCGCACAGTAATGTTAAACAACTATGGCAGGGGATGCAGGACCTTGATAAACTAGAGGTGATTGATCTAGGTGAATGCAGACATTTTGTTCAGCTTCCGGATTTGTCTAAGGCATCAAAACTTAAATGGGTTAATCTCTCCGGTTGTGTGAGTCTGGTGGATCTTCATTCATCTGTTCTTTTGGCTGAAACACTTACTACTCTGATACTTGACGGTTGTACAAAGCTTAGAAGTGTTAAAGGCCGGAAACATTTAAAGTTTTTGGAAAAGATCAGTATCATTGGCTGCACAAGTCTCGAGGAATTTGCCGTCTCCTCGGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATTCAAACACTTGACCTATCTATTGGGCTTCCTCACAATCTTAAGTGGCTTAATCTTGAGGGTTCAAGACTTGAGTATCTTCCAAAGGAGTTACCTAGCCTAACATCTATTAGGGAGCTTAGGATTTCTGGCAGTGGACTAAAAGTTAAGAAACAGCAGCTACATGTCTTGTTTGATGGCCTACGATCTCTACAAATACTACATTTGAAGGATTGTAATAACTTGTTTGAACTCCCTGACAACATCAGTGTCCTATCAAAATTACAGGAACTAATTCTAAATGGAAGCAACGTGAAAAGGTTGCCGGAAAGCATCAGGAATCTTCAAGGGCTAGAAATTCTGTCATTGGAGGAATGCAGGGAGATTCGGTACCTTCCAGAGCTCCCCTCTCTCATCAAATTGTTAAATGCCAGTAACTGCACGTCCCTGGTTTCAGTTTCAGATTTAAAAACTATTGCATCAAAGATGATGGGAAATGCCAAATACATTTCATTCAGGGACAGCCTGAATTTGGATGGGCGTTCACTCAAACATATAATGGAAAGTCTCAATTTAACAATGATGAGCGCTGCATTTCAAAATGTGTCTGTTAGAAGACTTCGTGTGGATGTTCACAGCTACAACTATACCAGTGTTGATGCTTGTCTACCAGGAACAAGGGTCCCAAGGCCGTTCAAATATCAAACTTCCACCGAGTCCTCCATTACCATTGAACTTCCTAACCAATGGAACTTACTGGGACTTCTTTACTCAGTGGTTCTTTCTCCAGCAGGTGGAATGAAGAAGGGTGGGACTATAATAAAATGTCGATGCGATTTGGGAGAAAAAGGTACAAAGGTTTCAAGGTTTAATACTTATGTCACGGAACTGAACTCGGATCATGTTTATGTATGGTACGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGCTTTGTTTTGAGTTTCGTGTTACTAATGATATGGAGGAAGTTGATGGTTCAATCTGTATTAAAGAGTGTGGAGTACGGCCTGTATGTGCTGATGAACTGCAGAGTGTTTTACAGCAATTGGATTTGGATTCAGAAAAGAGAAAAGAGTTAAAGAAGGCTGTGCGATTAGAAAAGAGTCCCACAAGCATTATACAAGAATCAGATTCAGAGATGGTTGAACCAGAGACAAATTCTAATTGGGAAGAGAGCAGTGCTGGAAAAGGCCGACAACATAATACCTCAAAGCCTTCAAAAGGTTGGAGTCACTTCTATTCTATTGGCAAACTTCGGGTTTCATCTTTTCTGAAAGTTTCAAAATTACAAACCAAGTTCAGTGCTGCAAGTGGTAGCAAGAAGAATGCCAAAAACTCTACAGAAGTCGTCAAAAGCAAAGGAAATGAAGGAAGACAATCTGAAGCTGAAGCTAAATTTCATCTACCGGTAACATCATCTGTTGAAGACAATGCTTCTGATAATAAACCAGGTGAAAACAACTATGATTGGCAAGATAATTTTGATGAGACCAAGAATTCAGAAGAAAACTCAAATATAGCAGGACAAATCACTGTTCCTGACACCAACGATCTAATAAGTGAACCAGGACAAAGAAAAGAAAATGCACCAATAATGAATCTTAGCGAACCTGTAGGTGGTCAAGAAGATGGATCAGATGATAACCCTTTTTCTGAACTTGAGAGCATCCTATTGGGAAGTCCAGAGTCCTCAACAAAAGCAACATGTTCCACAAATGACGATGCTGTAAGAGAAGCTTTGCATAACCTTGAATGCCTATTGGAAAATTCACTTGAGTCCATTGTCAGTGATGTTGAGCTACAACGACAACTACTAATGTCTTTGGAATACATAACACAAGCATCTCATGAAAATGTTTCTCCTAATGTTGTGATGCTTGTACAAAAAATGGCATCCTCTTTTGAGAACCTTTTCAAGGGCTTTGGCAGGACAAGAAAAGTGGTTGAGGATCACATTAATGCTTTGAAACAAAAAGAAAAGCTCATGCAGCGAGTGAGAGATGCTAAGAAACAAAAGGAATCAAAACAGAAAGAAAAGAGTCAGTTGGAAAATGAAGCCAAGCGTCTCAAGGAAGAGGTTGAAAAGGTGGATGAAAAAATTAGAATTCTTGTTGAGCAAAATAAAAGTATTGAATTGGAAATAACCAAGTTGAAGGAGAACATGGAAAGATGTGAAGGTGAAAAGAAGAAAGTGAAAAATGAGGCTAAGAATATGATAACTGAAAGCAAAGAGCTTATGTTGAGTATTAAAAATTCTAAATCTACATATGTTGCTGCCTTGGCAAAGCAACAGAAGTTGAAAGACAAATGGGAAGGTTTCAGAATAGATTTTGCAAACAACTATGGAAGTAGCACTACTTGA 4515 0.3838 MAKRALSTSYSNKKHDVFLSFRGEDTRIGFTSHLYDALNHKSIKTYIDYLLKRGEDVWPTLSEAIEDSHVSIVVFSENYASSKWCLEELVKILECRKVRGQVVIPVFYKTDPSHIRNQTGSYEKAFAKHERDLGINESDDSKRKVLSWKAALTEAANISGWDSKTHKDESNLIENVVNDVLQKLQLRYPNELEGIVGIEKFCGVVETLMTSIQMLGIWGMGGMGKTTIAKVLFAKFFAQYDHVCFANAKEYSLSKLLSELLKEEISPSIVVGTTFHMRRLRSKKVFIILDNVDSLDQFEYLYRVFIITTRDRQLLNERVHKIYEVKQWEDKESLELFSLEAFKQSHPRKGYEDLSQRAVAYAGGIPLALKVLGSNLRSKGTDFWESTFRKLNKFPKQEIQKVLKVSYDGLDRLEKKIFLDIAFFFKGEKKDHVIRILNACGLEASSGIEVLEDKALITISNGNRIQMHDLLKKMGSDIMRKECGINPATHTRLSGSEALEVIKENKGTSSIEGITLDLSQNNELPLCSDTFTKMKALRILKLYIPLGQSCSNAHLNLPMVLEPFSSELRYFEWIGYPFETLPQPFCAKLLVEIRMPHSNVKQLWQGMQDLDKLEVIDLGECRHFVQLPDLSKASKLKWVNLSGCVSLVDLHSSVLLAETLTTLILDGCTKLRSVKGRKHLKFLEKISIIGCTSLEEFAVSSDLIENLDLSSTGIQTLDLSIGLPHNLKWLNLEGSRLEYLPKELPSLTSIRELRISGSGLKVKKQQLHVLFDGLRSLQILHLKDCNNLFELPDNISVLSKLQELILNGSNVKRLPESIRNLQGLEILSLEECREIRYLPELPSLIKLLNASNCTSLVSVSDLKTIASKMMGNAKYISFRDSLNLDGRSLKHIMESLNLTMMSAAFQNVSVRRLRVDVHSYNYTSVDACLPGTRVPRPFKYQTSTESSITIELPNQWNLLGLLYSVVLSPAGGMKKGGTIIKCRCDLGEKGTKVSRFNTYVTELNSDHVYVWYDPFHCDSILKFYEPKLCFEFRVTNDMEEVDGSICIKECGVRPVCADELQSVLQQLDLDSEKRKELKKAVRLEKSPTSIIQESDSEMVEPETNSNWEESSAGKGRQHNTSKPSKGWSHFYSIGKLRVSSFLKVSKLQTKFSAASGSKKNAKNSTEVVKSKGNEGRQSEAEAKFHLPVTSSVEDNASDNKPGENNYDWQDNFDETKNSEENSNIAGQITVPDTNDLISEPGQRKENAPIMNLSEPVGGQEDGSDDNPFSELESILLGSPESSTKATCSTNDDAVREALHNLECLLENSLESIVSDVELQRQLLMSLEYITQASHENVSPNVVMLVQKMASSFENLFKGFGRTRKVVEDHINALKQKEKLMQRVRDAKKQKESKQKEKSQLENEAKRLKEEVEKVDEKIRILVEQNKSIELEITKLKENMERCEGEKKKVKNEAKNMITESKELMLSIKNSKSTYVAALAKQQKLKDKWEGFRIDFANNYGSSTT 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01325 1504 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Vifa4g01325 1504 Gene3D - 184 323 IPR027417 -
Vifa4g01325 1504 MobiDBLite consensus disorder prediction 1152 1206 - -
Vifa4g01325 1504 Gene3D Ribonuclease Inhibitor 702 898 IPR032675 -
Vifa4g01325 1504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 698 IPR044974 GO:0006952
Vifa4g01325 1504 Pfam C-JID domain 929 1060 IPR045344 -
Vifa4g01325 1504 SUPERFAMILY L domain-like 516 848 - -
Vifa4g01325 1504 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 186 - -
Vifa4g01325 1504 SUPERFAMILY "Winged helix" DNA-binding domain 398 483 IPR036390 -
Vifa4g01325 1504 MobiDBLite consensus disorder prediction 1152 1171 - -
Vifa4g01325 1504 Gene3D - 328 411 IPR042197 -
Vifa4g01325 1504 Pfam TIR domain 14 190 IPR000157 GO:0007165
Vifa4g01325 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 421 IPR027417 -
Vifa4g01325 1504 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 161 IPR035897 -
Vifa4g01325 1504 MobiDBLite consensus disorder prediction 1382 1406 - -
Vifa4g01325 1504 Gene3D Ribonuclease Inhibitor 507 701 IPR032675 -
Vifa4g01325 1504 PRINTS Disease resistance protein signature 362 376 - -
Vifa4g01325 1504 PRINTS Disease resistance protein signature 214 229 - -
Vifa4g01325 1504 PRINTS Disease resistance protein signature 608 624 - -
Vifa4g01325 1504 PRINTS Disease resistance protein signature 279 293 - -
Vifa4g01325 1504 MobiDBLite consensus disorder prediction 1090 1126 - -
Vifa4g01325 1504 MobiDBLite consensus disorder prediction 1190 1206 - -
Vifa4g01325 1504 Coils Coil 1366 1459 - -
Vifa4g01325 1504 Gene3D - 9 183 IPR035897 -
Vifa4g01325 1504 Pfam NB-ARC domain 204 410 IPR002182 GO:0043531
Vifa4g01325 1504 SMART till_3 14 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01325 Vifa-Chr4 394662924 394668418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01325 774 861 WRKY Transcription Factor Family AT4G12020 36.559 1.93e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01325 - - cam:101515491 2114.35