Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01309 ATGGCGAACAACGATTCACAATCCGATAAAAAGCTCCAAACCCGATTCTACAATCCATACAAAGACCTCGAAGTTCCCAGCCGAAATCTCTACCAGCTCCCAACTTCTCCGGAGTTTCTCTTCGACGAGGAAGCTCTCCGTAAACGCCGTTCCTGGGGCGAGAATCTCACCTTCTACACCGGATGCGGTTACCTCGGCGGTTCAATCGCCGGTGCCGGAGTTGGACTCGTAAGCGGAGTTCGATCTTTTGAATCCGGCGACACCATGAAACTCCGCGTTAATCGTATACTTAACTCATCCGGACATTCGGGTCGGACTTGGGGAAACCGTGTTGGGATCATTGGGTTGATGTATGCTGGAATCGAGAGCGGGATCGAGGCGGCTAGGGATACGGATGACGCCTGGAACAGCGTTGCGGCGGGTCTTGGCACCGGAGCATTATACAGAGCGGCAAGAGGGGTGAGATCGGCGGCAGTGGCCGGAGCTGTGGGTGGAGTTCTTGTTGGAGCTGCTGTCACGGCCAAACAAGCATTGAAACGATATGTGCCGATATGA 555 0.5423 MANNDSQSDKKLQTRFYNPYKDLEVPSRNLYQLPTSPEFLFDEEALRKRRSWGENLTFYTGCGYLGGSIAGAGVGLVSGVRSFESGDTMKLRVNRILNSSGHSGRTWGNRVGIIGLMYAGIESGIEAARDTDDAWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVTAKQALKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01309 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
Vifa4g01309 184 PANTHER TIM23 26 173 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01309 Vifa-Chr4 390659121 390659675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01309 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 72.043 3.29e-85 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01309 K17794 - gmx:100777112 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00313 5 49844779 49845345 Vifa4g01309 4 390659121 390659675 PCT