Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01300 ATGAGCATGACTGTTGCCGAGGAAGAATCAGAGGGAGAGATTCATGTCCCAGCTGAGATTGATTGGAAAATGCTTGATAAATCGAAGTTTTTCTTCCTTGGTGCTGCTTTATTTTCTGGTGTTTCAGCGACATTGTATCCTGTTGTTGTGTTGAAAACTAGGCAGCAAGTTGCTCAATCGCAAGTTTCTTGTATCAAGACTGCGTTTTCGTTGATTAAGGGTGAGGGGTTTAGAGCTTTGTATCGTGGGTTTGGTACTTCGTTGATGGGTACGATTCCTGCTAGAGCTTTATACATGGCTGCACTTGAGGTTACTAAGAGTAATGTGGGGACTGCTACGGTTGGTTTTGGACTTGCTGAACCGACTGCTGCTGCGATTGCTAATGCAGTTGCTGGTTTGACTGCTGCTTTGGCAGCTCAGCTTGTGTGGACGCCAGTTGATGTTGTGAGCCAAAGATTGATGGTTCAAGGTGGTTGTAATTCGAGTGATCCTAAGGGTTCTTCTGTTAGTGTGGTGGGCTTCATATTCTGTTACACAGAGGATGGTTTGGGGTGGAGTTGGATATTACTTGAGTAG 576 0.4497 MSMTVAEEESEGEIHVPAEIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGFGLAEPTAAAIANAVAGLTAALAAQLVWTPVDVVSQRLMVQGGCNSSDPKGSSVSVVGFIFCYTEDGLGWSWILLE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01300 191 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Vifa4g01300 191 SUPERFAMILY Mitochondrial carrier 23 163 IPR023395 -
Vifa4g01300 191 Gene3D Mitochondrial carrier domain 11 187 IPR023395 -
Vifa4g01300 191 Pfam Mitochondrial carrier protein 125 173 IPR018108 -
Vifa4g01300 191 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Vifa4g01300 191 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01300 Vifa-Chr4 388799891 388800576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01300 1 157 Chloroplast and Mitochondria Gene Families AT1G72820 76.433 1.67e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01300 K15121 - gmx:100784616 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01300 4 388799891 388800576 Vifa4g01300 4 388799891 388800576 ECH