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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa4g01298
ATGGACTCGCGCGCACAGTATAATCCTCGTACCGTTGAAGAGGTTTTTAGGGATTTCAAGGGTCGTCGAGCTGGTCTCATCAAAGCTCTCACCACTGATGTTGAAGATTTCTATAACCAATGTGATCCTGATAAGGAGAATTTGTGCTTATACGGCTTTCCTAGTGAGCAGTGGGAAGTTAATTTACCTGCTGAAGAAGTTCCACCGGAGCTTCCCGAGCCTGTGCTCGGAATCAACTTTGCTAGGGATGGCATGCAGGAAAAAGATTGGCTTTCTTTAGTTGCTGTTCATAGTGATTCATGGTTACTCGCTATTGCCTACTATTTCGGAGCCAGATTCGGGTTTGACAAATCTGACAGGAAACGCCTTTTCAATATGATCAATGAACTGCCATCGATATTTGAAGTTGTTACTGGTACAGCAAAGAAGCAAGTTAAGGAGAAGTCTTCAGTTTCAAACCACAGTGGAAGCAAATCCAAGTCCAGCTCAAAACAGCGAGCTCCCGAACACCAGGTTAAGCAGACAAAGGCATTAGAACCAAAAGACGAGGAAGAAGAACTGGACGAGGAAGATGAAGATGAACACGGAGAGACCTTATGTGGTGCATGCGGTGAGCATTATGGAACAGACGAATTCTGGATTTGCTGCGACATCTGTGAGAAGTGGTTCCATGGGAAATGTGTGAAGATCACACCTGCTAGGGCTGAGCATATCAAGCAATACAAGTGTCCATCATGCAGTAACAACAAGAGAGCTCGCCCATAA
765
0.451
MDSRAQYNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYNQCDPDKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDSWLLAIAYYFGARFGFDKSDRKRLFNMINELPSIFEVVTGTAKKQVKEKSSVSNHSGSKSKSSSKQRAPEHQVKQTKALEPKDEEEELDEEDEDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNNKRARP
254
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa4g01298
254
Pfam
PHD-finger
200
248
IPR019787
-
Vifa4g01298
254
PANTHER
CPG BINDING PROTEIN
8
253
IPR045104
GO:0006355|GO:0042393
Vifa4g01298
254
SMART
PHD_3
199
247
IPR001965
-
Vifa4g01298
254
ProSitePatterns
Zinc finger PHD-type signature.
200
246
IPR019786
-
Vifa4g01298
254
Pfam
Alfin
11
139
IPR021998
GO:0006355|GO:0042393
Vifa4g01298
254
MobiDBLite
consensus disorder prediction
145
193
-
-
Vifa4g01298
254
ProSiteProfiles
Zinc finger PHD-type profile.
197
249
IPR019787
-
Vifa4g01298
254
CDD
PHD_AL_plant
199
249
IPR044104
-
Vifa4g01298
254
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
190
248
IPR013083
-
Vifa4g01298
254
MobiDBLite
consensus disorder prediction
145
162
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa4g01298
Vifa-Chr4
388754931
388758077
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa4g01298
5
253
Alfin-like Transcription Factor Family
AT3G42790
74.297
2.98e-123
349
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Vifa4g01298
Alfin
3.7e-68
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa4g01298
K26274
-
gmx:100794662
446.817
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