Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01285 ATGTTGACTTGCATAGCTTGTTCAAAGCAACTCAATAATAGATCTCTTCATCAACAAGATGAGGAAGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATCAAGGCTCTCACAGCTCAGATCAAGGACATGGCAGTTAAGGTTTCTGGGTCTTATAAGAATTGCAAGCCTTGTTCAGGATCTTCCAATGGCAACAAGAACAAAAAGTATGCTGATTCTGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCATACCGAAGACCCGGGAGCGCGAATTCAACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCCAGTGGCGAAGCAACACCAACATCGGTTAGCGGTCGTACCGAGTCGGTTGCGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAACCTGGTGTGCTTATTACTTTTCTTTCATTGCCCCAAGGTGGGAATGATCTGAAGAAGATACGGTTCAGCCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCGGAAAACTATGACAAAGTTATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTATATCTGAAGATGAGAGCTCAAAGATTGAATCTTCAAGGGATAGCCCAGTTACACCTCCTCTAAGCAAAGAGCGTCTGCCCCGTCATTTACATCACCCAACAGGAATGGGCTACTCCTCATCAGATTCACTGGAACACCACCATATGCAACCGCAGCCTTGCTATGAAACAAGCGGTCTGGTATCAAAACCTAATCCTTCAGATGTTGGTGTTCCTAAGACCGAAAGATCATCCATTGATGCTTCTGCAAGGACGAGTTCATCAGAAGAGGAAGACAATCACTCAGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTACCAGGTGGAACCAGAGAACTCAGGCGCGTCCGCTTCAGCCGAGAGAAGTTTGGAGAAACGCGTGCTAGATTATGGTGGGAAGAGAACCGTGCGAGGATACAAGAGCAATACTTGTGA 1113 0.46 MLTCIACSKQLNNRSLHQQDEEEAVQTPSTKQAIKALTAQIKDMAVKVSGSYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNWAYRRPGSANSTPRMWGKEMEARLKGISSGEATPTSVSGRTESVAFMEEEDEPKEWVAQVEPGVLITFLSLPQGGNDLKKIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPISEDESSKIESSRDSPVTPPLSKERLPRHLHHPTGMGYSSSDSLEHHHMQPQPCYETSGLVSKPNPSDVGVPKTERSSIDASARTSSSEEEDNHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGETRARLWWEENRARIQEQYL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01285 370 ProSiteProfiles BRX domain profile. 315 370 IPR013591 -
Vifa4g01285 370 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 370 IPR044532 -
Vifa4g01285 370 Pfam Transcription factor regulating root and shoot growth via Pin3 314 369 IPR013591 -
Vifa4g01285 370 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Vifa4g01285 370 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Vifa4g01285 370 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Vifa4g01285 370 MobiDBLite consensus disorder prediction 201 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01285 Vifa-Chr4 386565717 386569040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01285 1 370 Major Intrinsic Protein MIP AT1G31880 46.649 6.26e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01285 - - gmx:100805480 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01285 4 386565717 386569040 Vifa4g01285 4 386565717 386569040 ECH