Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01279 ATGCAACCACAAGTTTCTAACCTCAATCCAAACGCTCAACCCTTCTATCCACAACACAACCTTGTAGTAGTAACACCTAAAACTCAATCCAGTGTTTATGTACCAAAACAAACAAAAAAAAACAACAACACACACACTGCAATTGATCTTGATTATTACAGTACAATTGAAGAGCTTATAGAAGTGGATCCTGAAAGGTTAAAGGAGGCACTGGCTGCACTAGGACTTAAAACTGGCGGCACTGTTCAGCAACGTGCAGAGAGGCTCTTCCTCACCAAGCATACACCTCTTGAAAAGTTGGACAAGAGGCATTTTATCAAGGGGGCACGGGGTTTAGAAAATAATGGGGTGGCTGCTGCTCCGCAAGAAGGAAATTTAAAACAAGAAAATTTGAAAGAAGTTGCATAA 408 0.4093 MQPQVSNLNPNAQPFYPQHNLVVVTPKTQSSVYVPKQTKKNNNTHTAIDLDYYSTIEELIEVDPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKRHFIKGARGLENNGVAAAPQEGNLKQENLKEVA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01279 135 MobiDBLite consensus disorder prediction 116 135 - -
Vifa4g01279 135 PANTHER SPLICING FACTOR SF3A-RELATED 12 109 - -
Vifa4g01279 135 Pfam Replication stress response SDE2 C-terminal 36 107 IPR025086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01279 Vifa-Chr4 385085020 385085748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01279 45 135 C2H2 Transcription Factor Family AT5G06160 65.934 1.10e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01279 K12827 - pvy:116133286 143.665