Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01226 ATGGCTTCTCCTTCTCCACACTCTCTGGCATTCTTCACTCTCTCTCTCATTTTCTCTCTCTCCCACTCATCAAACTCTCCACAAACCTACATCATCCACGTGTCAAAATCTCCACGCTCCTCCCTCTTCTCCACCAATCAAAACCATTTCTCCTCCATCCTCAACACCCTCCCTTCTTCCCCCAACCCACCTCCCATCCTCTACACCTACACATCCGCCATTCACGGCTTCTCCGCCCACCTAACCCCCTCCCAAGCCGACCACCTTAAATCCCACCCCGACATCCTCTCCATCCAACCCGACCAAATCCGACACCTCCACACAACACACACACCCGACTTCCTCGGACTCATCGAATCCTCCGGATTATGGCCAAACTCCCACTTCGCCTCCGACGTCATCGTCGGCGTCCTCGACACCGGAATCTGGCCGGAGCTCCAAAGCTTCTCCGACCAGTCCCTCTCTCTCTCCACTCTCCCTTCCTCCTGGAAAGGCACCTGCGAAACCACCAAAGATTTCCCTAAATCTTCATGCAACAACAAAATCATCGGCGCTAAATCTTTCTACAAAGGCTACGAAGCTTACCTTCAAAGACCCATCGATGAAACAGCCGAATCGAAATCTCCTCTAGACACACAAGGCCATGGAACTCACACAGCTTCAACCGCAGCAGGCTCAATCGTTGCAAACGCGAGCTTGTTTCATTTTGCTAGAGGTGAAGCTAAGGGAATGGCAACAAAAGCTAGAATCGCTGCTTACAAAATCTGTTGGGAGCTTGGTTGTTTTGATTCTGATATTCTTGCTGCTATGGATGAAGCTGTTGCAGATGGGGTTCATGTGATTTCACTCTCTGTTGGTTCTAATGGTTATGCGCCTCATTATTATCTTGATTCGATTGCGATTGGTGCTTTTGGTGCTGCGCAGCACGGTGTTGTTGTTTCTTGTTCTGCAGGTAATTCAGGTCCTGGTCCTTATACTTCTGTTAATATAGCTCCTTGGATTTTAACTGTTGGTGCTTCCACGATTGATAGAGAGTTTCCTGCTGATGTTGTTCTTGGCGATGGTAGAATTTTCGGCGGTGTTTCTTTGTATTATGGTCATGACTTGCCTGATTATAAGCTTCCTTTGGTTTATGCTAGTGATTGTGGTAGTAGATATTGTTACATAGGATTTTTAGATTCTTCGAAAGTGAAAGGGAAGATTGTTGTTTGTGATAGAGGAGGGAATGCTAGAGTTGAGAAGGGTAGTGCTGTGAAAAGTGCTGGTGGGTTAGGGATGATTATGGCTAATACTGAAGATAGCGGTGAAGAGCTTCTTGCTGATGCTCATCTTGTTGCAGCTACTATGGTTGGTCAGATTGCTGGTGATAAGATTAAAGAGTATATAAGATCGAGTGAGAATCCGACTGCTACGATCGAGTTTAAAGGTACTGTGATCGGTGGTTCGGATTCGCCTTCTGCTCCTAGAGTTGCTTCGTTTTCTAGCAGGGGTCCGAATTATAGAACTTCAGAGATTCTTAAACCAGATGTTATAGCTCCTGGTGTTAACATTTTAGCAGGGTGGACTGGTAAAGTTGGTCCTACTGATTTGGATTTGGATCCTAGACGAGTCGAGTTTAACATAATTTCAGGTACTTCTATGGCGTGTCCTCATGTGAGTGGAATTGCTGCATTGCTTAGGAAAGCTTATCCAAGTTGGTCACCAGCTGCGATTAAGTCAGCTTTGATGACAACTGCTTATAATGTTGATAACTCCGGCAAAGCAATTAAGGATCTTGGAACAGGTAAAGAGTCTAATCCATTTGTTCATGGAGCTGGACATGTTGATCCTAACAAAGCACTTAATCCCGGGTTGGTTTACGATATAAGCAGTAATGATTATTTAGCATTCCTTTGTTCAATTGGTTATGATGCTAGGAAAATTCAGGTTTTCACTAGAGAACCAACTAGTTATAATGTTTGTGAAAACAAAAGGAAATTTTCTAGTCCCGGCGATTTGAATTACCCTTCGTTCTCTGTTGTGTTCGGTGCAAACAACGGATTGGTTAAGTATAAAAGAGTTGTTACTAATGTTGGTGGTTCTGTTGATGCTGTTTACACTGTCAAAGTGAATGCTCCTTTCGGCGTTGATGTTAGTGTTTCACCTAGCAAACTTGTTTTCAGTAGTGAAAACAAAACTCAAGCTTTTGAGGTCACATTCACTAGAATTGGATATGGTGGTTCTCAGAGTTTTGGGTCACTGGAATGGAGTGATGGAGTTCATATTGTGAGGAGCGCAATTGCTGTTAGATGGGGCACTGGATTCTCATCAGCATCCTTTTGA 2322 0.4449 MASPSPHSLAFFTLSLIFSLSHSSNSPQTYIIHVSKSPRSSLFSTNQNHFSSILNTLPSSPNPPPILYTYTSAIHGFSAHLTPSQADHLKSHPDILSIQPDQIRHLHTTHTPDFLGLIESSGLWPNSHFASDVIVGVLDTGIWPELQSFSDQSLSLSTLPSSWKGTCETTKDFPKSSCNNKIIGAKSFYKGYEAYLQRPIDETAESKSPLDTQGHGTHTASTAAGSIVANASLFHFARGEAKGMATKARIAAYKICWELGCFDSDILAAMDEAVADGVHVISLSVGSNGYAPHYYLDSIAIGAFGAAQHGVVVSCSAGNSGPGPYTSVNIAPWILTVGASTIDREFPADVVLGDGRIFGGVSLYYGHDLPDYKLPLVYASDCGSRYCYIGFLDSSKVKGKIVVCDRGGNARVEKGSAVKSAGGLGMIMANTEDSGEELLADAHLVAATMVGQIAGDKIKEYIRSSENPTATIEFKGTVIGGSDSPSAPRVASFSSRGPNYRTSEILKPDVIAPGVNILAGWTGKVGPTDLDLDPRRVEFNIISGTSMACPHVSGIAALLRKAYPSWSPAAIKSALMTTAYNVDNSGKAIKDLGTGKESNPFVHGAGHVDPNKALNPGLVYDISSNDYLAFLCSIGYDARKIQVFTREPTSYNVCENKRKFSSPGDLNYPSFSVVFGANNGLVKYKRVVTNVGGSVDAVYTVKVNAPFGVDVSVSPSKLVFSSENKTQAFEVTFTRIGYGGSQSFGSLEWSDGVHIVRSAIAVRWGTGFSSASF 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01226 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Vifa4g01226 773 ProSiteProfiles Serine proteases, subtilase domain profile. 112 614 - -
Vifa4g01226 773 FunFam Subtilisin-like protease SBT1.5 631 765 - -
Vifa4g01226 773 CDD PA_subtilisin_like 349 472 - -
Vifa4g01226 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Vifa4g01226 773 Gene3D - 631 764 - -
Vifa4g01226 773 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vifa4g01226 773 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Vifa4g01226 773 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Vifa4g01226 773 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Vifa4g01226 773 CDD Peptidases_S8_3 105 580 IPR034197 -
Vifa4g01226 773 Gene3D - 343 479 - -
Vifa4g01226 773 SUPERFAMILY Protease propeptides/inhibitors 27 106 - -
Vifa4g01226 773 Pfam PA domain 374 457 IPR003137 -
Vifa4g01226 773 SUPERFAMILY PA domain 371 466 IPR046450 -
Vifa4g01226 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 762 IPR045051 -
Vifa4g01226 773 Gene3D Peptidase S8/S53 domain 132 627 IPR036852 GO:0004252|GO:0006508
Vifa4g01226 773 Pfam Subtilase family 131 585 IPR000209 GO:0006508|GO:0008236
Vifa4g01226 773 FunFam subtilisin-like protease SBT1.5 343 479 - -
Vifa4g01226 773 SUPERFAMILY Subtilisin-like 106 618 IPR036852 GO:0004252|GO:0006508
Vifa4g01226 773 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Vifa4g01226 773 FunFam Subtilisin-like protease SBT1.5 132 354 - -
Vifa4g01226 773 FunFam Subtilisin-like protease SBT1.9 18 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01226 Vifa-Chr4 369288741 369291062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01226 1 767 Subtilisin-like Serine Gene Family AT3G14067 64.607 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01226 - - tpra:123883043 1333.93