Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01224 ATGAAGGCGCTGAATGGGTTATTGGGTTTAAGACGCAGGAAAATTCATGGGGTTTTCAATGGGTTGTGTGCTATGGTTGTTTTGTTCTTTTTTTACAATAGGGAAGATATAATTCGTAATCCGATTCTTAGACATTCTGCGTATTTGGTTAATCATCATGGTTTGCCTCAAAATTCAATTTTGAAGGATGGGGTTTCGGTTTCTGTGATTCGCCGTAGAATGGATGAGATTAGTGCTAACACTTCAAGTGTAGCTGCTGATAATGATTTGGGTGTGATTAAACCTGGACTGTGTGTTGGATTGCTCCACCATGATGGTTTTGATAGCCCTTGTGAATTCTTAAAGGTGAATCCTCAGTGTACTTCTGAAGGGTATGTTGATTACTTGAGGTTTTTCTATTGTAAATGTCAAGGTTTTAGGGTTCTTGGTTATCTGGTATTGGGTGTTTGGCTTGCTGCTTTGTTTTATCTCTTGGGGAATACTGCAGCGGATTATTTCTGTCCTTCTCTTGAGCATCTCTCGAAGCTCTTGAAATTGCCTCCAACTGTGGCAGGCGTTGTTTTGCTTCCACTTGGAAATGGCGCACCTGATGTGTTTGCTAGTATAGCTTCGTTTGTTGGGACTGATACGGGTGAAGTTGGTCTTAACAGTGTATTAGGCGGTGCTCTGTTTGTTACCACTATTGTTGTTGGAACTGTTTCTCTTTGTGTTGCGGACAGGAAGGTTCAAATTGATCAACGATGCTTTGTAAGGGACCTGAGTTTCTTTCTGTTCACCCTTTTTGTGCTGCTTGTGATTTTGTTTGTTGGTACGATAGGTATTGGGGCAGCCATTGCTTTTGTATCGATTTATGTTGTTTATGCGTTCATTGTTGCTGCCAATGAGCTATTGCGGAAACATGCACGGATGTTGAAACTGGATGCTGTGACACCTTTGCTCCCTGTCCAAGGAAGTGTATTCTCTGTTGCTTCTGAAGAGGATACGACAATATATAGCTCTTTGCTTGCCTTAGACACTGAGACTGATCCTCCTCGTCTCCCTCCTTCCCTGCCTCAGTGGATGTGGTCTTCAAATGTGGCAATATACTCAAACCAGGCAAATAAAATCAATTTTTCAGATGATGAGAGGCCTCCTTGGGGATGGAGTGATGGATCCACAGAAAACACCAGGTCGTCGTTCTCCATTTCAAAGCTTTTTTTACTCATGGAGATGCCACTGGCAGTACCTAGACGGCTAACAATTCCAATGGTTCACGAGGAAGTATGGTCAAAGTCCTTTGCCGTGGCCAGTGCTTCATTGGCTCCCATTCTTCTGGCCTTTTTGTGGAGCACCCAAGATGATGTGAGTTATACGAGTATTATACTTGCTTATTGTTTTGGTGTTTCTGTTGGAAGCACACTTGGCATTCTTGCGTATAAATACACCGTGTCTGATTGTCCACCGTCTCAGTATTTGATTCCCTGGGTTCTCGGAGGATTTGTTATGAGCATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTTGCTCTATTAGTAGCATTTGGTGTAATTTTCGGAATTAATCCATCGATTCTTGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTAGCATTGGATGGAGATGATGGAGTTCAGATAGCTTTATCTGGATCTTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGAATCTCATTGCTGCTTGGCGCTTGGTCAAAGAAACCTTCTTCATATGTGGTACCTAAAGACGGTAGCTTATTCTACACAATGGGATTTCTTATCACTGGACTGCTATGGGCACTTGTTGTTTTACCGCGCAACAACATGCATCCTAGCAGAATGTTTGGAATGGGTCTCATCATCCTTTACATGCTTTTTCTTTCTTTCAGAGTATGTACTTCTTTGGGGCTAATAACAATTGCTGGTTTAAGTTAG 1965 0.4193 MKALNGLLGLRRRKIHGVFNGLCAMVVLFFFYNREDIIRNPILRHSAYLVNHHGLPQNSILKDGVSVSVIRRRMDEISANTSSVAADNDLGVIKPGLCVGLLHHDGFDSPCEFLKVNPQCTSEGYVDYLRFFYCKCQGFRVLGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSKLLKLPPTVAGVVLLPLGNGAPDVFASIASFVGTDTGEVGLNSVLGGALFVTTIVVGTVSLCVADRKVQIDQRCFVRDLSFFLFTLFVLLVILFVGTIGIGAAIAFVSIYVVYAFIVAANELLRKHARMLKLDAVTPLLPVQGSVFSVASEEDTTIYSSLLALDTETDPPRLPPSLPQWMWSSNVAIYSNQANKINFSDDERPPWGWSDGSTENTRSSFSISKLFLLMEMPLAVPRRLTIPMVHEEVWSKSFAVASASLAPILLAFLWSTQDDVSYTSIILAYCFGVSVGSTLGILAYKYTVSDCPPSQYLIPWVLGGFVMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALDGDDGVQIALSGSYAGPMFNTLVGLGISLLLGAWSKKPSSYVVPKDGSLFYTMGFLITGLLWALVVLPRNNMHPSRMFGMGLIILYMLFLSFRVCTSLGLITIAGLS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01224 654 FunFam Cation/calcium exchanger 5 426 642 - -
Vifa4g01224 654 Gene3D - 179 336 IPR044880 -
Vifa4g01224 654 Gene3D - 416 642 IPR044880 -
Vifa4g01224 654 Pfam Sodium/calcium exchanger protein 489 640 IPR004837 GO:0016020|GO:0055085
Vifa4g01224 654 Pfam Sodium/calcium exchanger protein 149 291 IPR004837 GO:0016020|GO:0055085
Vifa4g01224 654 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01224 Vifa-Chr4 368873114 368875078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01224 100 648 Antiporters AT5G17860 42.545 2.20e-138 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01224 K13754 - gmx:100796101 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01224 4 368873114 368875078 Vifa4g01224 4 368873114 368875078 ECH