Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01222 ATGTCAGCAACAATGATAAGTGATCCAATGATGATATCAACTTCAGCACCAGAAACTCAATCAACAGCATACATAGAAAGAATCAGAGAAAGGTATCAAGGAAAATGGGTTTGTGGATTATGCGGCGAAGCTGTTAAAGATGAAATTGTAAGGTCAGAGAGACTTGTAAGCACAGAAGAAGCAATGGTAAAACACATGAACTTTTGCAAAAAGTTCAATACTTCAGGTCCTCCTCCAAATCCAGCTGTTCATTTGATTTCAGCTATGAGACAGATTCTTAGGAGGAGTTTGGTTAGGTCCACGCCAAATAGTCCGGTTAATAAGAGTAGTAGAGAAATTCATGGTTCCGGACTCGCTAGGTCGGAAAGCTGCTTCTCTACTCTATCCGGTTCCTGA 396 0.4066 MSATMISDPMMISTSAPETQSTAYIERIRERYQGKWVCGLCGEAVKDEIVRSERLVSTEEAMVKHMNFCKKFNTSGPPPNPAVHLISAMRQILRRSLVRSTPNSPVNKSSREIHGSGLARSESCFSTLSGS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01222 131 MobiDBLite consensus disorder prediction 99 131 - -
Vifa4g01222 131 Pfam Protein of unknown function (DUF1677) 20 95 IPR012876 -
Vifa4g01222 131 PANTHER OS01G0745000 PROTEIN 21 129 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01222 Vifa-Chr4 368837960 368838439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01222 - - lja:Lj3g3v2576730.1 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03862 2 1126666824 1126667255 Vifa4g01222 4 368837960 368838439 ECH
Vifa4g01222 4 368837960 368838439 Vifa4g01222 4 368837960 368838439 ECH