Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01218 ATGACTGCAAATAAAAACGCAAGTATATTGCAGACTGAGGATTTGACCAAGTATATACTGGAAACTAGTGTTTATCCACGAGAAGCAGAAACTCTCAAAGATATAAGGAATGCCAATGAAAGCTACCCTATGGGCTTCATGGGCACTGCACCTGATGCGGGTCAACTAATGGCCATACTCTTGAAGTTGTTGAATGCTAAAAAAACAATTGAAGTCGGAGTTTTTACCGGATACTCCCTTCTCCTCACCGCACTTTCCATTCCTCATGATGGAAAGATCATAGCCGTGGATCCAGACAGAAAAGCTTACGAAATAGGACTTCCATCCATTAAAAAGGCTGGTGTTGAACATAAGATTGATTACATAGAGTCTCAAGCTTTGCCAGTTCTTGATAAACTCTTAGAAAATCCTTCAAATGATGGAAATTTTGACTTTGCTTTTGTGGATGCTGACAAACATAATTATTGGAATTATCATGAGAGGCTTATTAAACTGGTTAAGATTGGTGGATTAATCATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATTTCCTGAAGAAGCTGTTTTAGATCACCAAAGAAAAGTAAGACAAGATGCACTTGCTTTCAATGAAGCAATTGCAAGTGACACTCGTGTTGAAATTTGTCTTGCTTCAATTGGTGATGGTTTCACTATCTGTAGGCGTGCTCATTGA 699 0.3877 MTANKNASILQTEDLTKYILETSVYPREAETLKDIRNANESYPMGFMGTAPDAGQLMAILLKLLNAKKTIEVGVFTGYSLLLTALSIPHDGKIIAVDPDRKAYEIGLPSIKKAGVEHKIDYIESQALPVLDKLLENPSNDGNFDFAFVDADKHNYWNYHERLIKLVKIGGLIIYDNTLWGGTVAFPEEAVLDHQRKVRQDALAFNEAIASDTRVEICLASIGDGFTICRRAH 232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01218 232 CDD AdoMet_MTases 70 174 - -
Vifa4g01218 232 Gene3D Vaccinia Virus protein VP39 1 231 IPR029063 -
Vifa4g01218 232 PANTHER O-METHYLTRANSFERASE-RELATED 4 231 - -
Vifa4g01218 232 Pfam O-methyltransferase 21 230 IPR002935 GO:0008171
Vifa4g01218 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 230 IPR029063 -
Vifa4g01218 232 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 231 IPR002935 GO:0008171
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa4g01218 Vifa-Chr4 367695128 367696442 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01218 1 232 Monolignol Biosynthesis Gene Families AT4G26220 61.638 9.37e-110 313
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01218 K00588 - gmx:100780516 362.073