Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01212 ATGTCCTCGCCGGAGAATCTCCCCTTAGAAACCGCCCAAAAAATCATCCTCCGATGGGACTCCACCGCCTCCGAAGAAGCTCGGGAAAAAATGATCTTCGATCACACAACCAACCGCGACGAAATCGATCTTTACCTCCAAGCCGTCGATGAAATCCAACGCTCCATATCCTCCGCCTCTCTCTCCGATAGCCACCACTCCAATCCCTCCTCCACCATCCAGATCGCCATGGCTCGCTTGGAAGACGAGTTTCGTAACATCCTTATCTCAAATACAAACTCAATCGATACTCCCTTAGATGAAGACTCTTCCTTCTCTTCATCAATAAAACGACATCAGGACTTCAAAAACGACGAAGACGATAACGAAGACGACGAGGATCAAAACGACGATAAGCTTCTGCGTTTTGATAGTACTTGCTCTGTCGCAACTACTGCCACTTCTTCAAGCTACCGTTCTACCAGCAGCATCCGTGAGATCGATCTGATACCTACCGAAGCTGTCTCCGATCTCCGATGCATCGCCGATAGAATGATTTCCTCCGGTTATCTTCGCGAATGTATTCAAGTTTACGGAAGTGTGAGAAAATCGGCTGTGGATTTGAATTTCAAGAAACTCGGAGTTGAGAAACTAAGCATAGGTGATGTTCAGAGATTGGATTGGGAGCAGCTCGAGACGAAGATTCGGAGATGGATTCGAGCTGCCAAGGTTTGTGTTCGAACGCTTTTCGCCAGCGAGAAGAGACTATGTGAACAGATTTTTGAAGGGATTGGTAGTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTCGCTGAAGCGATTAGTATTAGTCGTAGGTCGCCCGAGAAATTGTTTAAGATTCTTGACCTGCATGATGCTTTGATGGATTTGATACCTGATGTTGATGTTGTTTTTGATTCCAAGTCGTCTGAGTCGATTCGGGTTCAGGCCGCGGAGATTTTGTCGCGGTTAGCGGAAGCTGCTAGAGGGATTTTGTCTGAATTTGAAAATGCTGTTTTGAAGGAGCCTTCTAAGGTTCCGGTTCCGGGTGGGACGATTCATCCTTTGACTAGGTATGTGATGAATTACATAAGCTTGATTTCCGATTATAAGCAGACTTTGTATGAGCTTATTGTTTCGAAGCCTTCCACGGGTTCTTATGATCCTTCGAATCCTGATATGGATTTTGATGAACTCGAAGAGAAACCTCCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTCAATTTAGATGGGAAGTCAAAGCATTATAAGGATGCTTCTTTGAGTCATTTGTTTATTATGAACAATGTTCACTATATTGTTCAGAAAGTTAGAGGGTCCCCGGAGTTGAGGGAAATGATTGGGGACGATTATTTGAGGAAGTTGACTGGGAAATTTCGACAGGCGGCTACTAGCTATCAGAGAGCGACGTGGGTTAGGGTTTTGTATTGTTTGCGAGATGAAGGGTTACACGGGAGTGGTGGGTTTTCTTCTGGCGTGTCGAAAAGTGCCTTGAGGGAAAGGTTTAAGGCTTTTAATGCTATGTTTGAGGAGGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCACAACTTAGGGAGGAGCTTCGGATATCTATATCAGAGAAGCTGCTTCCTGCTTATAGATCGTTCCTTGGACGGTTCAGGAGTCATATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCCGTCGAGGATCTGGAGGATGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGTGA 1842 0.4441 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDHTTNRDEIDLYLQAVDEIQRSISSASLSDSHHSNPSSTIQIAMARLEDEFRNILISNTNSIDTPLDEDSSFSSSIKRHQDFKNDEDDNEDDEDQNDDKLLRFDSTCSVATTATSSSYRSTSSIREIDLIPTEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDLNFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFEGIGSSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDVDVVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPSTGSYDPSNPDMDFDELEEKPPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSPELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHGSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLLPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01212 613 MobiDBLite consensus disorder prediction 99 131 - -
Vifa4g01212 613 SUPERFAMILY Cullin repeat-like 39 600 IPR016159 -
Vifa4g01212 613 Pfam Exo70 exocyst complex subunit 230 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa4g01212 613 Gene3D Exocyst complex component Exo70 15 609 - -
Vifa4g01212 613 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 601 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01212 Vifa-Chr4 366823629 366825470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01212 9 613 EXO70 exocyst subunit family AT1G72470 69.010 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01212 K07195 - gmx:100808671 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01212 4 366823629 366825470 Vifa4g01212 4 366823629 366825470 ECH