Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01191 ATGGTCAAGTTTGCAAAACTAACAAAGCTAACATCATTTATCAAAAAATGGCCTTCATTAACCAAACTAAGCCGCAACGGTAGAAACTCTAGGGCTTCCTCCTCCAAGCAAAAGCAACAGGAACCAAAGCTTCATGCTGTCTACGTCGGAAAGTCGCGGCGCCGATATCTCGTGAACTCCAAAGTTTTTCAGCACCCGGTTTTTCAGGAGCTAGTTGATAGGTCTTGTTGCAATGGTGGATGTGAGGACGGTGTTGTGGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGGTGTGGATGCTTGAGAGTGCTGAAAATGAGACACAATTGGGATCCATTGATGAACTTGTGCGATTTTATCATTGTGGTGCTTGTTGA 381 0.4331 MVKFAKLTKLTSFIKKWPSLTKLSRNGRNSRASSSKQKQQEPKLHAVYVGKSRRRYLVNSKVFQHPVFQELVDRSCCNGGCEDGVVVVSCEVVLFEHLVWMLESAENETQLGSIDELVRFYHCGAC 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01191 126 PANTHER EXPRESSED PROTEIN 16 121 - -
Vifa4g01191 126 MobiDBLite consensus disorder prediction 23 41 - -
Vifa4g01191 126 MobiDBLite consensus disorder prediction 23 42 - -
Vifa4g01191 126 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01191 Vifa-Chr4 360592293 360592673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01191 3 124 Calmodulin-binding Proteins AT4G34750 24.427 2.14e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01191 - - gmx:100797158 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01191 4 360592293 360592673 Vifa4g01191 4 360592293 360592673 ECH