Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01190 ATGGGAGGGTTAATGATTTTCATATGCATGTTTGTTTCATGGATATTCATACATAGATGGAGTCAAAGAAACAAAAAAGGCCCCAAAACTTGGCCTTTTCTTGGAGCTGCCATTGAACAATTGATGAACTATGATAGAATGCATGATTGGCTTGTTGAATATTTTTACATGTCCAAAACTGTTGTTGTCCCCATGCCATTCACAACCTATACATACATTGCTGATCCTGTTAATGTGGAACATGTACTTAAGACCAACTTCAATAATTATCCTAAGGGTGAAGTGTACCATTCGTATATGGAAGTGCTTCTTGGACATGGAATATTCAATGTTGATGGAGAGCTTTGGAAGAAACAAAGAAAAACTGCTAGCTTAGAATTTGCATCAAGAAATTTAAGAGATTTCAGCACCAAAGTTTTCAAGGAGTATGCTTTAAAACTCTCATCAATTCTCAATCAAGCATCTTTTCTCAACCAACAAATAGACATGCAGGAGTTATTGATGAGAATGACATTAGATTCTATATGCAAAGTTGGTTTTGGAGTGGAAATTGGAACTTTGAATCCAAATTCACCAAAAAACTCTTTTGCTCAAGCTTTTGATACTGCGAATATCATTGTAACACTTCGTTTCATCGATCCATTATGGAAAATTAAGAAAATTCTAAATCTTGGCTCCGAAGCACAACTTGATAAGAGCATCAAAATCATTGATGACTTCACTTACTCGGTTATTCGAACAAGAAAGGCCGAGATAGAGGATGCGAAAAAGAGTGGCCAAGAAAATCAGATAAAGAATGATATATTATCAAGATTCATAGAGCTGGGAGAAGACAATGCAAGTGACAAGAGTTTGAGAGATGTTGTTTTGAACTTTGTGATTGCTGGTAGAGACACAACTGCAACAACTCTATCATGGGCTATATATATGGTGATGACACATTCTCATGTTGCTGAAAAGCTTTACTTGGAGCTCAAAACTTTTGAAGAGAATCAAGCAAAAGAAGAGAATGTTACTTTGCCTCAGTGTGATGATGAGGACATAGATGAACATGAATTGTTCAATCAAAGAGTAGTGCAGTTTTCAAAATTGTTGAATAAAGATTCATTAGAGAGATTGCACTATTTGCATGCTGTTATAACTGAGACACTAAGATTATATCCGGCCGTTCCTCAGGATCCCAAAGGTGTGATGGAGGATGATGTGTTGCCAGATGGTACAAAAATAAAAGCAGGAGGCATGGTAACTTATGTTCCATATTCAATGGGAAGGATGGAGTATAATTGGGGCCCTAATGCTGCTTCATTTAATCCTGAAAGATGGTTCCATGATGGTGTTCTTAAAAATGAATCTCCATTCAAATTCACAGCTTTTCAGGCAGGGCCAAGAATATGTCTTGGTAAGGACTCTGCATATCTTCAGATGAGGATGGTATTAGCAATTTTGTGCAGATTTTACAAGTTCAATTTGGTGTCTGGTCATCAAGTGAAATACAGAATGATGACTATTTTATCAATGGCACATGGCTTGAAGCTTACCATAGAGAAACGTTCTTGA 1557 0.3661 MGGLMIFICMFVSWIFIHRWSQRNKKGPKTWPFLGAAIEQLMNYDRMHDWLVEYFYMSKTVVVPMPFTTYTYIADPVNVEHVLKTNFNNYPKGEVYHSYMEVLLGHGIFNVDGELWKKQRKTASLEFASRNLRDFSTKVFKEYALKLSSILNQASFLNQQIDMQELLMRMTLDSICKVGFGVEIGTLNPNSPKNSFAQAFDTANIIVTLRFIDPLWKIKKILNLGSEAQLDKSIKIIDDFTYSVIRTRKAEIEDAKKSGQENQIKNDILSRFIELGEDNASDKSLRDVVLNFVIAGRDTTATTLSWAIYMVMTHSHVAEKLYLELKTFEENQAKEENVTLPQCDDEDIDEHELFNQRVVQFSKLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGVMEDDVLPDGTKIKAGGMVTYVPYSMGRMEYNWGPNAASFNPERWFHDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVSGHQVKYRMMTILSMAHGLKLTIEKRS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01190 518 SUPERFAMILY Cytochrome P450 17 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PANTHER CYTOCHROME P450 15 510 - -
Vifa4g01190 518 CDD CYP86A 59 510 - -
Vifa4g01190 518 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 Pfam Cytochrome P450 27 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 FunFam Alkane hydroxylase MAH1 21 518 - -
Vifa4g01190 518 Gene3D Cytochrome P450 11 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g01190 518 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01190 Vifa-Chr4 359298092 359300230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01190 1 518 Cytochrome P450 AT1G69500 73.814 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01190 K20495 - gmx:100787802 927.546