Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01180 ATGTCTCCATTATTCCCTTCCCTCATTCTCCTCTTCTTCTTCTTCACCACCACCCTGCTCCCCCAACCTTCATTCTCACAAACCTCAACCAAAACTTTCATCATCCAAGTCCAACATGATTCAAAACCTTCCATTTTCCCATCTCACAAAAACTGGTACCAATCCTCACTCTCTTCCATCACAACAACCACACCAACTACCATCATCCACACATACGACACCGTTTTCCACGGCTTCTCTGCAAAACTCACGCCTCAAGAAGCTCAAAATCTTGAACTACTCCCCCATGTTATTACTGTCATACCCGAACAAATCCGAACGCTCCATACAACCCGTTCACCGCAGTTCCTAGGCTTGAAAACCGCTGACAGAACCGGCCTTCTCCATGAAACGGACTTCGGGTCGGATCTTGTTATCGGAGTTATTGATACCGGAATCTGGCCGGAAAGAGAGAGTTTTAACGACCGGGAGCTTGGTCCGGTTCCGTCCAAATGGAAAGGTCACTGTATTGCTGGGAGAGATTTCCCGGTCAGTTCTTGTAATAGGAAAATCATCGGAGCAAAGTATTTCTCCGGCGGGTACGAAGCTACAAGCGGGAAGATGAATGAGACTACTGAATATCGTTCTGTTAGAGACTCAGATGGACATGGGACACACACTGCTTCCATCGCCGCCGGGAGATATGTTTCTCCGGCGTCTACTTTGGGTTTTGCTAAAGGTGTTGCGGCTGGGATGGCACCCAAGGCTCGTCTTGCTGTTTATAAAGTTTGCTGGAGCGGTGGTTGTTTTGATTCTGATATTCTTGCTGCCTTTGATGCTGCGGTGGCGGACGGTGTTGACGTGGTTTCTCTCAGTGTCGGTGGGGTTGTTGTGCCGTACCATCTTGATGTTATTGCTATTGGTGCTTTTGGAGCTTCTGATGCCGGAGTTTTTGTTTCTGCCTCTGCCGGAAACGGTGGTCCCGGTGGGCTTACTGTCACCAATGTAGCTCCTTGGGTGGCTACTGTCGGTGCTGGAACAATAGATAGGGATTTTCCTGCGGATGTGAAGCTTGGAAATGGGAAGATTATACCCGGGGTTAGTATCTATGGTGGACCGGGTTTAACTCCGGGTCGGTTGTACCCGATTGTGTATGCCGGGAGTACTGAACACGGTGGCGAAGGTGGTGATGGTTATTCGTCTTCACTTTGTTTAGAAGGTTCTTTAGATCCTAAGTCTGTAAGAGGAAAAATTGTTGTTTGTGATAGAGGCATTAATTCAAGAGCTGATAAAGGTGAAGTAGTTAAAAAATCAGGTGGAATTGGCATGATTTTGGCTAATGGAGTGTTTGATGGTGAAGGGTTAGTGGCGGATTGCCACATTTTACCCGCCACATCGGTTGGTGCAATAGGCGGCGATGTAATTAGAAGTTACATCGCCTCTGCAGATAAATCCGTTGGATCACTACCAACCGCAACTATTGTGTTTAAGGGAACTAGGCTTGGGGTTAGGCCAGCTCCCGTGGTAGCATCATTCTCGGCGAGAGGGCCTAACCCTGAATCGCCCGACATTTTGAAACCGGATGTTATAGCACCTGGTTTAAACATTCTAGCCGCTTGGCCAGACAAAGTCGGACCTTCTGGGATTGCGTCTGATCATAGAAGGACCGAATTCAACATATTGTCGGGTACATCAATGGCTTGTCCTCACGTTTCCGGTTTAGCTGCTTTGTTGAAAGCAGCTCACCCTGATTGGAGTCCAGCTGCTATTAAATCAGCTCTTATGACAACTGCTTATACTGTCGATAACAAAGGCGATCCAATGTTGGATGAATCCAACGGGAACGTTTCATCTGTCTTTGATTATGGAGCAGGACATGTTCATCCTGAGAAAGCACTGGATCCTGGTTTGGTTTACGATGTCTCAGTCTACGATTACGTCGATTTCTTGTGTAACTCAAATTACACCACAAAGAACATTCAAATAATCACAAGAAAAACTGCAGATTGTAGCGACGCCAAAAAAGCCGGACACTCCGGAAACTTGAATTATCCATCATTATCTGCAGTTTTTCAACAATATGGAAAACACAAAATGTCTACACATTTCATTAGGACTGTGACCAATGTTGGTGACCCAAAATCAGTTTACAAAGTAACAACTAACCCACCTGAAGGAATGGTGGTAACTGTGAAACCAGATATATTGCATTTCAGAAGAATTGGTCAGAAATTGAATTTCCTTGTTAGGGTACAAACTAGAGAAGTTAAGCTTTCACCTGGAAGTTCATTAGTGAAGAGTGGTTCCATAGTTTGGTTTGATGGAAAACACACTGTCACAAGTCCTTTAGTTGTGACAATGCAGCAACCTCTTGATTAG 2358 0.4563 MSPLFPSLILLFFFFTTTLLPQPSFSQTSTKTFIIQVQHDSKPSIFPSHKNWYQSSLSSITTTTPTTIIHTYDTVFHGFSAKLTPQEAQNLELLPHVITVIPEQIRTLHTTRSPQFLGLKTADRTGLLHETDFGSDLVIGVIDTGIWPERESFNDRELGPVPSKWKGHCIAGRDFPVSSCNRKIIGAKYFSGGYEATSGKMNETTEYRSVRDSDGHGTHTASIAAGRYVSPASTLGFAKGVAAGMAPKARLAVYKVCWSGGCFDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAIGAFGASDAGVFVSASAGNGGPGGLTVTNVAPWVATVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRLYPIVYAGSTEHGGEGGDGYSSSLCLEGSLDPKSVRGKIVVCDRGINSRADKGEVVKKSGGIGMILANGVFDGEGLVADCHILPATSVGAIGGDVIRSYIASADKSVGSLPTATIVFKGTRLGVRPAPVVASFSARGPNPESPDILKPDVIAPGLNILAAWPDKVGPSGIASDHRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDPMLDESNGNVSSVFDYGAGHVHPEKALDPGLVYDVSVYDYVDFLCNSNYTTKNIQIITRKTADCSDAKKAGHSGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPKSVYKVTTNPPEGMVVTVKPDILHFRRIGQKLNFLVRVQTREVKLSPGSSLVKSGSIVWFDGKHTVTSPLVVTMQQPLD 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01180 785 CDD Peptidases_S8_3 107 592 IPR034197 -
Vifa4g01180 785 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Vifa4g01180 785 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Vifa4g01180 785 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vifa4g01180 785 FunFam Subtilisin-like protease SBT1.5 136 352 - -
Vifa4g01180 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Vifa4g01180 785 Gene3D Peptidase S8/S53 domain 136 639 IPR036852 GO:0004252|GO:0006508
Vifa4g01180 785 SUPERFAMILY Protease propeptides/inhibitors 31 107 - -
Vifa4g01180 785 SUPERFAMILY Subtilisin-like 108 630 IPR036852 GO:0004252|GO:0006508
Vifa4g01180 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Vifa4g01180 785 SUPERFAMILY PA domain 404 483 IPR046450 -
Vifa4g01180 785 Pfam PA domain 374 461 IPR003137 -
Vifa4g01180 785 Pfam Subtilase family 134 608 IPR000209 GO:0006508|GO:0008236
Vifa4g01180 785 ProSiteProfiles Serine proteases, subtilase domain profile. 113 626 - -
Vifa4g01180 785 Pfam Fibronectin type-III domain 674 778 IPR041469 -
Vifa4g01180 785 FunFam Subtilisin-like protease SBT1.9 22 109 - -
Vifa4g01180 785 Gene3D - 643 781 - -
Vifa4g01180 785 FunFam subtilisin-like protease SBT1.5 342 494 - -
Vifa4g01180 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 778 IPR045051 -
Vifa4g01180 785 FunFam Subtilisin-like protease SBT1.5 643 781 - -
Vifa4g01180 785 Gene3D - 342 495 - -
Vifa4g01180 785 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Vifa4g01180 785 CDD PA_subtilisin_like 348 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01180 Vifa-Chr4 354527293 354529650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01180 32 784 Subtilisin-like Serine Gene Family AT3G14240 76.658 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01180 - - gsj:114418214 1243.02