Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01174 ATGGAAGGTGAAGGTCCATCAATGGAGAATCCCAAAATCTCAGCATACTATCAAACCAGGCTAGCACACTTCGGCGTCGTCAGCACCGAGTGGCTAGCTCAGGCTCAGTCTGCAACGAAACCAATCCCATCATCATCAACCGACACATCCACTGATAAAGATGCCAATTTTTCTGTAATTGATGAATTCAATAGGTGGCGTAATCATCCCGATTTGGCCGAGGCTGTCGCCGCTATTCGTGCCCTCGCTGCCGTTATCAGCTCCAGTAAAGCTTCCACTATGATGCAGCTTGAAATCGAACTCAAAAACGCCTCTGATACCCTCAAAGCATGGGATACAACCTCTATCTCATTGACAGCAGCATCTGATCTGTTTATGAGATACGTTACAAGAACATCTGCTTTGGAATTTGAAGACTTCAATTCTGCAAAAGCTCGTTTGATTGAGCGTGCTGACAAGTTTGGGGAAATCTCCTACAAGGCTCGCAAGGTTATTGGAATGCTTAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCTAGAGTTGTCTTTGAAGTTCTTAAACTGGCTGCACATAATAAGAAACATTTTCGGGTCTTCTGCACAGAGGGGAGACCAGATCGAACAGGTTTAAGGCTGTCCAATGAGCTGGCCAAGCTTGATGTACCCGTGAAACTTGTGATAGACTCTGCAGTGGCTTATACCATGGATGATGTGGACATGGTATTTGTCGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATTAATATGATGGGAACGTACCAAATTGCGTTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCCCGTCATTACCCTCTCGACCAAAAGGATTTGGCACCCGCCCTACGACCAGTTGATTTCGGTGTACCTATTCCATCTAAGGTTGAGGTTGAATGCTCTGCCCGGGATTATACTCCTCCTCAGTATCTGACTTTGCTTTTCACAGATTTAGGCGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATACTTATAA 1071 0.4426 MEGEGPSMENPKISAYYQTRLAHFGVVSTEWLAQAQSATKPIPSSSTDTSTDKDANFSVIDEFNRWRNHPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDTLKAWDTTSISLTAASDLFMRYVTRTSALEFEDFNSAKARLIERADKFGEISYKARKVIGMLSQDFIFDGCTILVHGFSRVVFEVLKLAAHNKKHFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDDVDMVFVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARHYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01174 356 FunFam Translation initiation factor eIF-2B subunit alpha 55 157 - -
Vifa4g01174 356 FunFam Translation initiation factor eIF-2B subunit alpha 160 356 - -
Vifa4g01174 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 72 355 IPR037171 -
Vifa4g01174 356 Gene3D - 159 356 IPR042529 -
Vifa4g01174 356 Pfam Initiation factor 2 subunit family 70 344 IPR000649 GO:0044237
Vifa4g01174 356 Coils Coil 94 114 - -
Vifa4g01174 356 Gene3D - 54 157 IPR042528 -
Vifa4g01174 356 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 25 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01174 1 356 Eukaryotic Initiation Factors Gene Family AT1G53880 79.213 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01174 K03239 - gmx:102669842 577.4