Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01108 ATGACTACACATATTTCTCTATGCTTCTTGTTCTCCTACGTTACATTCCTTCCCCTCATATTCACCACATTTGCTCAATCTCAAAACTATATCATCCACATGAACCTATCAGCCATGCCCAAACAATTCACAAACCATCACACATGGTACCAATCAACTCTTTCTTCAGCATTACAAAACTCTCAATTCACAACAACAACCAATAATCTCAACTCTCTAATTTCTTCCAAGTTTATTTACACCTACACGCATGTCATGAATGGTTTCAGTGCTAATTTGTCACCAAAAGAACATGAACTCCTCAAAACCTCACCAGGTTACATTTCTTCAATACCTGATTTACCTGTGAAGCTTGACACAACATACTCACCTCAGTTCCTTGGTCTCAATCCAAACAAAGGTGCGTGGCACGACTCGGATTTCGGCATTGACGTAATTATTGGCGTAATCGACACCGGAGTTTGGCCAGAAAGTGATAGTTTCAAAGATTATGGAATGACTGAAGTTCCTTCAAAATGGAAAGGACAATGTGAAAACAGCATCCATTTCAATAAGTCACTTTGTAACAAAAAACTCATCGGTGCTAAATTCTTCAACAGAGGATTGTTAGCCCAAAATCCAAACGCAACCTTAGGGTTAAACTCCACACGTGACACAAAAGGCCATGGGACTCACACTTCAACAACAGCCGCAGGAAGTAGAGTTGATAAAGCATCATTCTATGGCTATGCAAATGGAACTGCTTCTGGAATAGCTTCAAATTCACGTGTAGCAATGTATAAAGCTCTATGGCAAAATGGAGCCTCGTCATCTGATGTAATAGCTGCAATTGACGCGGCAATATCAGACGGTGTCGATGTTCTTTCATTATCATTAGGTCTTGATGATGTACCTTTGTATGAAGAACCTGTAGCTATAGCAACATTTGCAGCTGTGGAAAAAGGTGTTGTTGTAGCTACTTCTGCTGGAAATGACGGACCAGTCCTTAAAACTCTTCACAATGGAACACCTTGGGTCATAACGGTTGCTGCTGGAACTATGAATAGAGATTTTCAAGGAACTCTTACACTTGGAAATGGTAACAAAATTGTGGGTTTTTCTCTTTACATAGGAGCGTTTTCTTCTAACAATTTTCCAATTGTTTTCATGGGTTTATGTGATAGTGTTAACGATTTGAAACAAGTGAAAAGCAAGATTGTGGTGTGTGAAGACAAGAATGGAACTAGTGTTTATAATCAACTCTATAATTTGGGTGTAGCACAAGTTTTTGGTGCAGTTTTGATTTCAAATGTCACATTAACAGATATACTATATAAAAAGTTTTTAGCATCCATTATTGTCAATCCAATCAATGGTGAGATTATCAAAGACTACATCAAGAGTTTTAACTCAAAAAACTCTAGTTCTATAGCAAGTATGTCTTTCAAGAAAACAGTATTTGGAACAAAACAAGCACCTAGTGTTGATTCTTATAGTTCAAGAGGTCCATCAAAAAGTTGTCCATATGTTTTGAAACCTGACATCACTGCGCCCGGAACTTTAATCTTAGCGGCATGGCCTTCAAACGTTCTTGTTTCGCATTTGGGGACTAAAGAAGCTTTCAGCAGTTTCAATATGATAAGTGGAACATCTATGGCATGTCCTCATGTTGCAGGCATAGCGGCGCTTTTAAAAGGCGCGCACAGAGATTGGAGCCCAGCGGCTATTCGGTCAGCGATTATGACAACATCAGACATATTTGATAATACTAAGGAACATATAAAAGACATTGATGATAACAAAGATGCAACCCCTTTAGCATTGGGAGCTGGTCATGTTAACCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGCTGGTGTACAAGATTACGTTAATCTTCTTTGTGCACTTAACTTCACACAACAAAACATCACTACCATTACGAGATCCCCTTTCAATGATTGCTCTAAACCTTCCTTAGATCTTAATTATCCTTCTTTTATTGCTTTCTTCAATGGTGGAAATTCTTCAAAAACATTACATGAATTTCACAGAACAGTTAGCAATGTTGGTGAAGGGAAAACAATTTATACTGCTAGCGTTACTCCTATTAAAGGTTTTAGTGTTAGTGTTATCCCAAACAAGTTAGTGTTTCATGAGAAGAATCAAAAGTTGAGCTTCAAGTTGAGGATTGAAGTTGAAAGAATGGCAAAATTAAAGGAAGTGGCTTTTGGATATCTAAGTTGGATGGATGAGAAGCATGTAGTTAGGAGTCCTATTGTGATCACAACCATCAAACAGAAATCCTAG 2295 0.3808 MTTHISLCFLFSYVTFLPLIFTTFAQSQNYIIHMNLSAMPKQFTNHHTWYQSTLSSALQNSQFTTTTNNLNSLISSKFIYTYTHVMNGFSANLSPKEHELLKTSPGYISSIPDLPVKLDTTYSPQFLGLNPNKGAWHDSDFGIDVIIGVIDTGVWPESDSFKDYGMTEVPSKWKGQCENSIHFNKSLCNKKLIGAKFFNRGLLAQNPNATLGLNSTRDTKGHGTHTSTTAAGSRVDKASFYGYANGTASGIASNSRVAMYKALWQNGASSSDVIAAIDAAISDGVDVLSLSLGLDDVPLYEEPVAIATFAAVEKGVVVATSAGNDGPVLKTLHNGTPWVITVAAGTMNRDFQGTLTLGNGNKIVGFSLYIGAFSSNNFPIVFMGLCDSVNDLKQVKSKIVVCEDKNGTSVYNQLYNLGVAQVFGAVLISNVTLTDILYKKFLASIIVNPINGEIIKDYIKSFNSKNSSSIASMSFKKTVFGTKQAPSVDSYSSRGPSKSCPYVLKPDITAPGTLILAAWPSNVLVSHLGTKEAFSSFNMISGTSMACPHVAGIAALLKGAHRDWSPAAIRSAIMTTSDIFDNTKEHIKDIDDNKDATPLALGAGHVNPNRALDPGLVYDAGVQDYVNLLCALNFTQQNITTITRSPFNDCSKPSLDLNYPSFIAFFNGGNSSKTLHEFHRTVSNVGEGKTIYTASVTPIKGFSVSVIPNKLVFHEKNQKLSFKLRIEVERMAKLKEVAFGYLSWMDEKHVVRSPIVITTIKQKS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01108 764 Gene3D - 348 480 - -
Vifa4g01108 764 SUPERFAMILY Subtilisin-like 118 616 IPR036852 GO:0004252|GO:0006508
Vifa4g01108 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 756 IPR045051 -
Vifa4g01108 764 FunFam Subtilisin-like protease SBT1.5 144 357 - -
Vifa4g01108 764 Pfam Peptidase inhibitor I9 30 118 IPR010259 -
Vifa4g01108 764 CDD Peptidases_S8_3 116 578 IPR034197 -
Vifa4g01108 764 FunFam Subtilisin-like protease SBT1.9 20 119 - -
Vifa4g01108 764 Gene3D Peptidase S8/S53 domain 144 625 IPR036852 GO:0004252|GO:0006508
Vifa4g01108 764 CDD PA_subtilisin_like 354 459 - -
Vifa4g01108 764 Gene3D - 629 760 - -
Vifa4g01108 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Vifa4g01108 764 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Vifa4g01108 764 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vifa4g01108 764 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vifa4g01108 764 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Vifa4g01108 764 ProSiteProfiles Serine proteases, subtilase domain profile. 121 612 - -
Vifa4g01108 764 Pfam Subtilase family 144 586 IPR000209 GO:0006508|GO:0008236
Vifa4g01108 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 118 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01108 Vifa-Chr4 335701439 335703733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01108 1 764 Subtilisin-like Serine Gene Family AT5G67090 46.565 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01108 - - gmx:100786751 978.008