Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01106 ATGGCTTCCAATATTTCTCTCCTTTTGTTGTTCTCCTATATTACAACAATCCTTCATTTTATTATTTTCACATTTGCTCAATCTGATAATTATATCATTCACATGAATTTATCAGCTATGCCAAAAGCATTCTCAAATCAACATAGTTGGTATCATTCCACTCTTTCTCAAGTTACTACTGCCAACAATAATCTTAATTCTCCTTCTTCTAAAATCATTTATACATACACTAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTCAAGATCATGAATCTCTCAAAAACTCTCCTGGTTACATTTCTTCAATGCCTGATTTACCCTTGAAGCTTGACACAACACACTCACCTCAATTTCTTGGCCTTAATCCCTACAAAGGAGCATGGCCAGCTTCTGAGTATGGCAAAGATATCATTGTTGGTGTAATAGACACAGGCGTTTGGCCAGAAAGTGAAAGTTTCAAAGATGATGGAATGACTGAAATACCATCAAAATGGAAAGGCCAATTATGTCAATTTGATAATTCCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAACAAAGGGTTCTTAGCAAAATATTCCAACCTTAGTACAACCATTACGAACACGACCCGTGACGCAGACGGTCATGGAACACATACTTCAACAACTGCAGCTGGAAGCAAAGTTGATGGTGCATCTTTCTTTGGTTACGCAAATGGAACAGCAAGAGGAATAGCTTCGTTATCTAGACTAGCCATATACAAGAATGCATGGGGAAAGAATGGAGATGCAGTTTCATCTGATGTAATAGCAGCAATTGACGCTGCAATATCGGACGGTGTAGATGTTCTTTCGATATCTTTAGGCGATAACAATGTATCTTTATATGAAGATGCTATTGCAATAGCCACTTTTGCAGCAATGGAAAAAGGTGTTATTGTTTCCACTTCAGCAGGTAATAATGGAGCTTCCTTTAAATCTCTCCACAATGGAACACCATGGGTGATTACTGTTGCTGCTGGTACTATGGACCGTGAATTTCATGGGAATATTACACTTGGTAATGGTGTCTCACTCACAGGTTTGTCTTCTTATATAGGAAATTTCTCTGCTAGCAATTTTCCTGTTGTTTTCATGGGTAAGTGTGATAATGTTGAAGAATTAAAAAAAGTGAAGAGTAACATTGTGGTTTGTGAAGATAATAGTGGAATTGTTACTGCTCAAATATCAAATCTAGTTGAAGCAAAGGTTGTTGGAGGTGTTTTCATATCAAATATGCCAAACATATATGATTTAGACAATATTTTTCCATCCATCATTATTGATCAGATAAATGGAGAAATTGTGAAAGCTTACATAAAGAGTTATACCTCAAAAAACTCTAGTTCTATAGCAAGCATGTCTTTCAAGAAAACCATTTTTGGTGCTAAGGCATCACCTAAGGTTGATTCTTATAGTTCAAGAGGGCCATCATATAGTTGTCCATATGTGTTGAAACCTGACATTACAGCTCCTGGTACATCAATCTTAGCCGCATGGCCTCCGAATATTCCTGTGTTGGAATATGGAACAAAAGTCTACAACAAGTTCAATGTTTTATCCGGAACATCTATGTCATGTCCTCATGTTGCTGGCGTGGCAGCCCTCTTAAAAGGAGCGCGTCCAGATTGGAGCCCGGCAGCTATTAGGTCAGCCATGATGACAACATCAGACATACTTGATAATACTAAGCAACCCATCAAAGACATTGGAAACGATAACAAAGATGCAACCCCTTTAGCATTGGGAGCTGGTCATGTTAACCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAATTTCACACAACAAAACATCACTGCCATTACAGGATCATCTTTCAATGATTGCTCTAAACCTTCTTTGGATCTTAATTATCCTTCTTTTATTGCTTTCTTCAATGGTGGAAATTCTTCTGTCAGGACAACCCATGAATTTCGCAGAACAGTTACCAATGTTGGTGAAGGACAATCTACTTATTTTGCTAGCATTACTCCAATTAAAGGGTTTAATATCAGTGTTGTACCAAATAAGTTGGTCTTCAATAAGAAGAATCGGAAGATTAGCTTCAAGTTGAAGATTGAAGGACAAAAAGTGACACAAAAGAATGAAGTATCTTTTGGATATCTCACTTGGAAAGATAGCACGCATGTGGTGAGGAGTCCTGTTGTTGTAACTACACCCGATTTCAATTTGTAG 2286 0.3727 MASNISLLLLFSYITTILHFIIFTFAQSDNYIIHMNLSAMPKAFSNQHSWYHSTLSQVTTANNNLNSPSSKIIYTYTNVMNGFSANLSPQDHESLKNSPGYISSMPDLPLKLDTTHSPQFLGLNPYKGAWPASEYGKDIIVGVIDTGVWPESESFKDDGMTEIPSKWKGQLCQFDNSNNSSLCNKKLIGARFFNKGFLAKYSNLSTTITNTTRDADGHGTHTSTTAAGSKVDGASFFGYANGTARGIASLSRLAIYKNAWGKNGDAVSSDVIAAIDAAISDGVDVLSISLGDNNVSLYEDAIAIATFAAMEKGVIVSTSAGNNGASFKSLHNGTPWVITVAAGTMDREFHGNITLGNGVSLTGLSSYIGNFSASNFPVVFMGKCDNVEELKKVKSNIVVCEDNSGIVTAQISNLVEAKVVGGVFISNMPNIYDLDNIFPSIIIDQINGEIVKAYIKSYTSKNSSSIASMSFKKTIFGAKASPKVDSYSSRGPSYSCPYVLKPDITAPGTSILAAWPPNIPVLEYGTKVYNKFNVLSGTSMSCPHVAGVAALLKGARPDWSPAAIRSAMMTTSDILDNTKQPIKDIGNDNKDATPLALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNFTQQNITAITGSSFNDCSKPSLDLNYPSFIAFFNGGNSSVRTTHEFRRTVTNVGEGQSTYFASITPIKGFNISVVPNKLVFNKKNRKISFKLKIEGQKVTQKNEVSFGYLTWKDSTHVVRSPVVVTTPDFNL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01106 761 CDD PA_subtilisin_like 352 457 - -
Vifa4g01106 761 FunFam Subtilisin-like protease SBT1.5 138 355 - -
Vifa4g01106 761 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vifa4g01106 761 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vifa4g01106 761 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Vifa4g01106 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 113 IPR037045 -
Vifa4g01106 761 Pfam Fibronectin type-III domain 652 754 IPR041469 -
Vifa4g01106 761 CDD Peptidases_S8_3 110 573 IPR034197 -
Vifa4g01106 761 ProSiteProfiles Serine proteases, subtilase domain profile. 109 608 - -
Vifa4g01106 761 FunFam Subtilisin-like protease SBT1.9 21 113 - -
Vifa4g01106 761 Gene3D - 346 476 - -
Vifa4g01106 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Vifa4g01106 761 SUPERFAMILY Subtilisin-like 112 612 IPR036852 GO:0004252|GO:0006508
Vifa4g01106 761 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Vifa4g01106 761 Gene3D Peptidase S8/S53 domain 138 621 IPR036852 GO:0004252|GO:0006508
Vifa4g01106 761 Pfam Subtilase family 136 580 IPR000209 GO:0006508|GO:0008236
Vifa4g01106 761 Gene3D - 625 757 - -
Vifa4g01106 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 754 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01106 Vifa-Chr4 334919692 334921977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01106 1 743 Subtilisin-like Serine Gene Family AT5G67090 44.764 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01106 - - gmx:100786751 960.288