Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01105 ATGGCTTTCAATATTTGTCTCTTTTTGTTGTTCTCCTATATTACAACAATCCTTCATTTTATTAATTTCTCATTTGCTCAATCTGATAATTATATCATTCACATGGATTTATCAGCTATGCCAAAAGCATTCTCAAATCAACATAGTTGGTATCATTCTACTCTTTCAAAAGTTACTACTACCAACAATAATCTTAATTCTTCCCCTTCTAAAATCATTTATACATATGATAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTCAAGATCATGAATCTCTCAAAAACTCTCATGGCTACATTTCTTCAATGCCAGATTTACCATTGAAGCTTGACACAACACACACACCTCAATTCCTTGGTCTTAATCCTTATAAAGGAGCATGGCCAGCTTCTGAGTATGGCAAAGATATCATTGTTGGTGTAATAGATACAGGTGTTTGGCCAGAAAGTGAAAGTTTCAAAGATGATGGAATGACTGAAATACCATCAAAATGGAAAGGCCAATTATGTCAATTTGATAATTCCAATAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAACAAAGGGTACTTAGCAAAATATTCCAACCTTAGTAAAACCATTGTGAACGACTCGCGTGACACAGCTGGTCATGGAACGCATACTTCATCAACAGCAGCTGGAAGCAAAGTTGATGGTTCGTCTTTCTTTGGTTATGCGAATGGAACAGCAAGAGGAATAGCCTCATTGTCTAGACTAGCCATATACAAGACTGTGTGGGGAGCAGAGGGAGATGCAATGTCATCTGATATAATAGCTGCAATTGATGCCGCATTATCAGACGGTGTCGATGTCCTTTCGATGTCACTAGGCTATAACAATGTATCTTTGTATGACGATGCAGTTGCAATAGCCACATTTTCAGCTATGGAAAAAGGTGTTTTTGTGTCTACTTCAGCGGGTAATAGTGGACCTTCCTCTCAATCTCTTCACAATGGAGCACCTTGGGTGATAAACGTTGCTGCCAGTACTTCGGATCGTGAATTCTATGGAAATCTTACACTTGGTAATGGAGTTTCACTCAGTGGCTTATCTTCTTATGTAGGTAATTTTTCTGCTACTAATATCCCAGTTGTTCTCGTGGATAATTGTGAAAGCCCTGAAGAACTAATCAAAATTAAGAACAAGATTGTAGTTTGTGAAGCCAAGAAAGGATATGTTGTAGGTCAGTTTTATAATGCGTTTTCCGCAAAAGTTGCTGGAGCTGTTTTCATTTCAAACGGATCACAAAACGATCTATCACAATTCTTATGGTATCCGCTTCCATCCATCGTTATTAATCAGAAAGATGGAGAAATTGTCAAAGATTACATAATGAGGAACTCTAACTCTAGTAAAATACAAAACATGTCTTTCAAGATGACATATTTTAGTGCTAAGCCATCACCTAAGGTTGATTCTTATAGTTCAAGAGGACCATCAAATAGTTGTCCATATGTGTTGAAGCCAGACATTACAGCTCCCGGTACATCAATTTTAGCTGCATGGCCTACAAATATTCCTGTGTTGAATTTTGGAACTGAAGTCTACAACAACTTCAAATTTTTATCCGGAACATCTATGTCATGTCCTCATGTCGCTGGCGTGGCAGCACTTTTAAAAGGAGCGCATCCAGATTGGAGCCCGGCAGCTATTAGGTCAGCCATGATGACAACATCAGACATATTTGATAATACTAAGCAACCCATCAAAGACATTGGAAACGATAACAATGATGCAACCCCTTTAGCATTGGGAGCTGGTCATGTTAACCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGCTGGTGTACAAGATTACGTTAATCTTCTTTGTGCACTTAACTTCACACAACAAAACATCACTGCCATTACGAGATCCCCTTTCAATGATTGCTCTAAACCTTCCTTAGATCTTAACTACCCTTCTTTTATTGCTTTCATAAGTGCTGGAAATACTTCTGTAAGGACAATCCATAACTTTCACAGAACTGTTACCAACGTTGACGAAGGACAATTTACTTATTTTGCTAGCATTACTCCAATTAAAGGGTTTAATATCAGTGTTGTACCAAATAAGTTGGTCTTCAACAAGAAGAACCGGAAGATAAGCTTCAAGTTGAAGATTGAAGGAGAAAAGGTGACAAAGAACAATGAAGTATCTTTTGGATACCTCACTTGGAATGATGGGAAACATGTAGTGAGGAGCCCTATTGTGGTAACTACCCCCAATTTCAATTTGTAG 2289 0.3775 MAFNICLFLLFSYITTILHFINFSFAQSDNYIIHMDLSAMPKAFSNQHSWYHSTLSKVTTTNNNLNSSPSKIIYTYDNVMNGFSANLSPQDHESLKNSHGYISSMPDLPLKLDTTHTPQFLGLNPYKGAWPASEYGKDIIVGVIDTGVWPESESFKDDGMTEIPSKWKGQLCQFDNSNNSSLCNKKLIGARFFNKGYLAKYSNLSKTIVNDSRDTAGHGTHTSSTAAGSKVDGSSFFGYANGTARGIASLSRLAIYKTVWGAEGDAMSSDIIAAIDAALSDGVDVLSMSLGYNNVSLYDDAVAIATFSAMEKGVFVSTSAGNSGPSSQSLHNGAPWVINVAASTSDREFYGNLTLGNGVSLSGLSSYVGNFSATNIPVVLVDNCESPEELIKIKNKIVVCEAKKGYVVGQFYNAFSAKVAGAVFISNGSQNDLSQFLWYPLPSIVINQKDGEIVKDYIMRNSNSSKIQNMSFKMTYFSAKPSPKVDSYSSRGPSNSCPYVLKPDITAPGTSILAAWPTNIPVLNFGTEVYNNFKFLSGTSMSCPHVAGVAALLKGAHPDWSPAAIRSAMMTTSDIFDNTKQPIKDIGNDNNDATPLALGAGHVNPNRALDPGLVYDAGVQDYVNLLCALNFTQQNITAITRSPFNDCSKPSLDLNYPSFIAFISAGNTSVRTIHNFHRTVTNVDEGQFTYFASITPIKGFNISVVPNKLVFNKKNRKISFKLKIEGEKVTKNNEVSFGYLTWNDGKHVVRSPIVVTTPNFNL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01105 762 SUPERFAMILY Subtilisin-like 112 613 IPR036852 GO:0004252|GO:0006508
Vifa4g01105 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 755 IPR045051 -
Vifa4g01105 762 ProSiteProfiles Serine proteases, subtilase domain profile. 109 609 - -
Vifa4g01105 762 FunFam Subtilisin-like protease SBT1.5 138 354 - -
Vifa4g01105 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Vifa4g01105 762 Pfam Fibronectin type-III domain 653 755 IPR041469 -
Vifa4g01105 762 Gene3D Peptidase S8/S53 domain 138 622 IPR036852 GO:0004252|GO:0006508
Vifa4g01105 762 CDD PA_subtilisin_like 352 465 - -
Vifa4g01105 762 Gene3D - 346 478 - -
Vifa4g01105 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Vifa4g01105 762 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Vifa4g01105 762 FunFam Subtilisin-like protease SBT1.9 20 113 - -
Vifa4g01105 762 CDD Peptidases_S8_3 110 574 IPR034197 -
Vifa4g01105 762 Pfam Subtilase family 136 584 IPR000209 GO:0006508|GO:0008236
Vifa4g01105 762 Gene3D - 626 758 - -
Vifa4g01105 762 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vifa4g01105 762 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Vifa4g01105 762 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01105 Vifa-Chr4 334895747 334898035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01105 1 744 Subtilisin-like Serine Gene Family AT5G67090 43.026 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01105 - - gmx:100786751 903.664